Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF2Q99496 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 AC004461.1-201ENST00000412461 403 ntBASIC12.32□□□□□ -0.44
RNF2Q99496 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF2Q99496 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.32□□□□□ -0.44
RNF2Q99496 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.32□□□□□ -0.44
RNF2Q99496 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.32□□□□□ -0.44
RNF2Q99496 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.32□□□□□ -0.44
RNF2Q99496 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 AP000344.2-201ENST00000512987 629 ntBASIC12.32□□□□□ -0.44
RNF2Q99496 RNA5SP410-201ENST00000516285 106 ntBASIC12.32□□□□□ -0.44
RNF2Q99496 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 SLC25A39P2-201ENST00000537614 270 ntBASIC12.32□□□□□ -0.44
RNF2Q99496 AL450472.2-201ENST00000603663 1156 ntBASIC12.32□□□□□ -0.44
RNF2Q99496 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.32□□□□□ -0.44
RNF2Q99496 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.32□□□□□ -0.44
RNF2Q99496 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF2Q99496 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RNF2Q99496 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF2Q99496 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
RNF2Q99496 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.32□□□□□ -0.44
RNF2Q99496 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RNF2Q99496 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RNF2Q99496 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RNF2Q99496 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.32□□□□□ -0.44
RNF2Q99496 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 REXO1L2P-201ENST00000425429 2069 ntBASIC12.31□□□□□ -0.44
RNF2Q99496 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RNF2Q99496 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 BNIP3P1-202ENST00000550043 1585 ntBASIC12.31□□□□□ -0.44
RNF2Q99496 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RNF2Q99496 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
RNF2Q99496 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.31□□□□□ -0.44
RNF2Q99496 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 AC010327.5-201ENST00000586923 3061 ntBASIC12.31□□□□□ -0.44
RNF2Q99496 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
RNF2Q99496 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 MIR1233-2-201ENST00000408138 82 ntBASIC12.31□□□□□ -0.44
RNF2Q99496 MIR1233-1-201ENST00000408722 82 ntBASIC12.31□□□□□ -0.44
RNF2Q99496 KRT18P32-201ENST00000424695 1287 ntBASIC12.31□□□□□ -0.44
RNF2Q99496 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.31□□□□□ -0.44
RNF2Q99496 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF2Q99496 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.31□□□□□ -0.44
RNF2Q99496 AC004835.2-201ENST00000603762 682 ntBASIC12.31□□□□□ -0.44
RNF2Q99496 AC134684.3-201ENST00000641758 218 ntBASIC12.31□□□□□ -0.44
RNF2Q99496 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RNF2Q99496 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RNF2Q99496 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 AC009090.5-201ENST00000624886 2285 ntBASIC12.31□□□□□ -0.44
RNF2Q99496 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF2Q99496 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.31□□□□□ -0.44
RNF2Q99496 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RNF2Q99496 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.31□□□□□ -0.44
RNF2Q99496 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 AC073869.1-201ENST00000415574 2762 ntBASIC12.3□□□□□ -0.44
RNF2Q99496 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RNF2Q99496 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.3□□□□□ -0.44
RNF2Q99496 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RNF2Q99496 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms