Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 KRT8P22-201ENST00000562317 1415 ntBASIC15.02■□□□□ -0
RAB3IPQ96QF0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 AC016734.2-201ENST00000624325 1377 ntBASIC15.02■□□□□ -0
RAB3IPQ96QF0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 KRT18P34-201ENST00000488218 1270 ntBASIC15.02■□□□□ -0
RAB3IPQ96QF0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RAB3IPQ96QF0 AL450472.2-201ENST00000603663 1156 ntBASIC15.02■□□□□ -0
RAB3IPQ96QF0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
RAB3IPQ96QF0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 KRT8P24-201ENST00000560290 1559 ntBASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RAB3IPQ96QF0 Z82170.1-201ENST00000625081 3192 ntBASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 GHSR-202ENST00000427970 912 ntBASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 MIR4515-201ENST00000584082 81 ntBASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 AL139288.1-201ENST00000623748 933 ntBASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB3IPQ96QF0 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms