Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.79■□□□□ 0.12
CSPG4P5Q96PW8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 HMGN1P19-201ENST00000436976 333 ntBASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 TERF1P3-201ENST00000505638 1227 ntBASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 CTBP2P3-201ENST00000585629 1255 ntBASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 BX539320.1-201ENST00000623759 877 ntBASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CSPG4P5Q96PW8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 SOCS2P1-201ENST00000417727 557 ntBASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 WASH4P-201ENST00000564273 1246 ntBASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AC140912.1-201ENST00000577171 1054 ntBASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 PRSS30P-206ENST00000641773 873 ntBASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CSPG4P5Q96PW8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSPG4P5Q96PW8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSPG4P5Q96PW8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CSPG4P5Q96PW8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms