Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.21■□□□□ 0.19
ALPK3Q96L96 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ALPK3Q96L96 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ALPK3Q96L96 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ALPK3Q96L96 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ALPK3Q96L96 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ALPK3Q96L96 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALPK3Q96L96 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALPK3Q96L96 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALPK3Q96L96 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALPK3Q96L96 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 AP000322.3-201ENST00000608665 388 ntBASIC16.2■□□□□ 0.18
ALPK3Q96L96 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.2■□□□□ 0.18
ALPK3Q96L96 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALPK3Q96L96 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALPK3Q96L96 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALPK3Q96L96 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALPK3Q96L96 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALPK3Q96L96 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALPK3Q96L96 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ALPK3Q96L96 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 KRT18P46-201ENST00000435568 1279 ntBASIC16.19■□□□□ 0.18
ALPK3Q96L96 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 FLJ38576-201ENST00000623820 2459 ntBASIC16.19■□□□□ 0.18
ALPK3Q96L96 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 AL672207.1-201ENST00000328462 1570 ntBASIC16.19■□□□□ 0.18
ALPK3Q96L96 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 GUSBP10-201ENST00000417412 665 ntBASIC16.19■□□□□ 0.18
ALPK3Q96L96 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.19■□□□□ 0.18
ALPK3Q96L96 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ALPK3Q96L96 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 AC073869.2-201ENST00000417338 1026 ntBASIC16.18■□□□□ 0.18
ALPK3Q96L96 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 AL118522.1-201ENST00000611368 560 ntBASIC16.18■□□□□ 0.18
ALPK3Q96L96 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 AC025183.3-201ENST00000623526 1482 ntBASIC16.18■□□□□ 0.18
ALPK3Q96L96 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ALPK3Q96L96 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.18■□□□□ 0.18
ALPK3Q96L96 AC127383.1-201ENST00000444697 1800 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms