Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CHMP6Q96FZ7 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP6Q96FZ7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP6Q96FZ7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP6Q96FZ7 AL356585.2-201ENST00000625078 2396 ntBASIC15.53■□□□□ 0.08
CHMP6Q96FZ7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP6Q96FZ7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP6Q96FZ7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP6Q96FZ7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 AC105206.1-202ENST00000314927 2368 ntBASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 PRSS29P-201ENST00000440800 595 ntBASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 VN2R19P-201ENST00000442399 1052 ntBASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 OR7E47P-204ENST00000575924 449 ntBASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 SLC25A6P4-201ENST00000586535 553 ntBASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.52■□□□□ 0.08
CHMP6Q96FZ7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.52■□□□□ 0.07
CHMP6Q96FZ7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 AC009947.1-201ENST00000444350 727 ntBASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 AC109635.5-201ENST00000533593 962 ntBASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHMP6Q96FZ7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP6Q96FZ7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms