Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 AC106881.1-201ENST00000605849 3329 ntBASIC16.24■□□□□ 0.19
TRIM11Q96F44 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TRIM11Q96F44 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM11Q96F44 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 GAPDHP40-201ENST00000505218 1006 ntBASIC16.23■□□□□ 0.19
TRIM11Q96F44 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 LILRP1-201ENST00000444199 1370 ntBASIC16.23■□□□□ 0.19
TRIM11Q96F44 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM11Q96F44 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM11Q96F44 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM11Q96F44 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM11Q96F44 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms