Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 AC142381.1-201ENST00000426099 345 ntBASIC13.67□□□□□ -0.22
RFT1Q96AA3 AL645939.2-201ENST00000427340 991 ntBASIC13.67□□□□□ -0.22
RFT1Q96AA3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 AC092902.6-201ENST00000641783 218 ntBASIC13.67□□□□□ -0.22
RFT1Q96AA3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 REXO1L2P-201ENST00000425429 2069 ntBASIC13.67□□□□□ -0.22
RFT1Q96AA3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
RFT1Q96AA3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RFT1Q96AA3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 SPDYE11-202ENST00000450699 704 ntBASIC13.66□□□□□ -0.22
RFT1Q96AA3 TIMM8BP1-201ENST00000452384 211 ntBASIC13.66□□□□□ -0.22
RFT1Q96AA3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 KRT8P48-201ENST00000515599 1220 ntBASIC13.66□□□□□ -0.22
RFT1Q96AA3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 SPDYE9P-201ENST00000570642 692 ntBASIC13.66□□□□□ -0.22
RFT1Q96AA3 MIR4313-201ENST00000580760 101 ntBASIC13.66□□□□□ -0.22
RFT1Q96AA3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 SPDYE10P-202ENST00000612005 668 ntBASIC13.66□□□□□ -0.22
RFT1Q96AA3 SPDYE8P-202ENST00000612377 668 ntBASIC13.66□□□□□ -0.22
RFT1Q96AA3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RFT1Q96AA3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RFT1Q96AA3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms