Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 PPT1-215ENST00000641471 2368 ntBASIC16.22■□□□□ 0.19
ATP2A3Q93084 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.22■□□□□ 0.19
ATP2A3Q93084 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATP2A3Q93084 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 C1QBPP1-201ENST00000400117 770 ntBASIC16.21■□□□□ 0.19
ATP2A3Q93084 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 KRT18P43-201ENST00000469825 1281 ntBASIC16.21■□□□□ 0.19
ATP2A3Q93084 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 SSR4P1-203ENST00000599569 2260 ntBASIC16.21■□□□□ 0.19
ATP2A3Q93084 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ATP2A3Q93084 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATP2A3Q93084 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP2A3Q93084 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.21■□□□□ 0.18
ATP2A3Q93084 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATP2A3Q93084 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
ATP2A3Q93084 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 AC020658.6-201ENST00000623564 1870 ntBASIC16.2■□□□□ 0.18
ATP2A3Q93084 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 TMBIM7P-203ENST00000641617 1718 ntBASIC16.2■□□□□ 0.18
ATP2A3Q93084 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 AC005229.1-201ENST00000392885 409 ntBASIC16.2■□□□□ 0.18
ATP2A3Q93084 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 KLF2P4-201ENST00000451959 1225 ntBASIC16.2■□□□□ 0.18
ATP2A3Q93084 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 VDAC1P7-201ENST00000462417 847 ntBASIC16.2■□□□□ 0.18
ATP2A3Q93084 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 AC009486.1-201ENST00000569860 813 ntBASIC16.2■□□□□ 0.18
ATP2A3Q93084 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 AC097359.3-201ENST00000603982 1210 ntBASIC16.2■□□□□ 0.18
ATP2A3Q93084 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms