Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNED1Q8TER0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SNED1Q8TER0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNED1Q8TER0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNED1Q8TER0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNED1Q8TER0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNED1Q8TER0 BCL2-203ENST00000589955 5011 ntBASIC18.3■□□□□ 0.52
SNED1Q8TER0 AC092127.1-201ENST00000567093 3455 ntBASIC18.3■□□□□ 0.52
SNED1Q8TER0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SNED1Q8TER0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 AC136759.1-202ENST00000530858 2194 ntBASIC18.29■□□□□ 0.52
SNED1Q8TER0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 AL157407.1-201ENST00000435784 904 ntBASIC18.29■□□□□ 0.52
SNED1Q8TER0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 IGHV3-37-201ENST00000518544 340 ntBASIC18.29■□□□□ 0.52
SNED1Q8TER0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNED1Q8TER0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SNED1Q8TER0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 AC006122.1-201ENST00000493323 440 ntBASIC18.28■□□□□ 0.52
SNED1Q8TER0 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 MIR4649-201ENST00000582839 64 ntBASIC18.28■□□□□ 0.52
SNED1Q8TER0 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 AC074138.1-201ENST00000611182 1303 ntBASIC18.28■□□□□ 0.52
SNED1Q8TER0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
SNED1Q8TER0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNED1Q8TER0 CYP4F23P-201ENST00000593402 1579 ntBASIC18.27■□□□□ 0.52
SNED1Q8TER0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNED1Q8TER0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNED1Q8TER0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNED1Q8TER0 CICP13-201ENST00000422015 2789 ntBASIC18.27■□□□□ 0.52
SNED1Q8TER0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNED1Q8TER0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNED1Q8TER0 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNED1Q8TER0 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.27■□□□□ 0.52
SNED1Q8TER0 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.27■□□□□ 0.52
SNED1Q8TER0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.27■□□□□ 0.52
SNED1Q8TER0 MIR6720-201ENST00000611664 98 ntBASIC18.27■□□□□ 0.52
SNED1Q8TER0 AP001065.2-201ENST00000617205 644 ntBASIC18.27■□□□□ 0.52
SNED1Q8TER0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms