Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC067750.1-201ENST00000608826 6545 ntBASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 DNAJB3-201ENST00000446806 729 ntBASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 AC105339.1-204ENST00000636249 355 ntBASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 AC097359.2-201ENST00000604992 2389 ntBASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DNAAF1Q8NEP3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 AL022342.1-201ENST00000400363 863 ntBASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 AC136604.1-201ENST00000418535 575 ntBASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 POLD2P1-201ENST00000511220 997 ntBASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 AC005829.1-201ENST00000570002 483 ntBASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DNAAF1Q8NEP3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms