Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 AC004461.1-201ENST00000412461 403 ntBASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 AL513210.1-201ENST00000629608 234 ntBASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCNYL1Q8N7R7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 AL022342.1-201ENST00000400363 863 ntBASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 AC007967.4-201ENST00000614700 386 ntBASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.21■□□□□ 0.03
CCNYL1Q8N7R7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 AL035456.1-201ENST00000456064 1369 ntBASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.21■□□□□ 0.02
CCNYL1Q8N7R7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCNYL1Q8N7R7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms