Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RFX6Q8HWS3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 REXO1L2P-201ENST00000425429 2069 ntBASIC16■□□□□ 0.15
RFX6Q8HWS3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RFX6Q8HWS3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RFX6Q8HWS3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16■□□□□ 0.15
RFX6Q8HWS3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16■□□□□ 0.15
RFX6Q8HWS3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RFX6Q8HWS3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RFX6Q8HWS3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16■□□□□ 0.15
RFX6Q8HWS3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16■□□□□ 0.15
RFX6Q8HWS3 AC011467.4-201ENST00000594891 528 ntBASIC16■□□□□ 0.15
RFX6Q8HWS3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RFX6Q8HWS3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16■□□□□ 0.15
RFX6Q8HWS3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RFX6Q8HWS3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16■□□□□ 0.15
RFX6Q8HWS3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RFX6Q8HWS3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
RFX6Q8HWS3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16■□□□□ 0.15
RFX6Q8HWS3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 AL359258.3-201ENST00000622910 2331 ntBASIC16■□□□□ 0.15
RFX6Q8HWS3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFX6Q8HWS3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16■□□□□ 0.15
RFX6Q8HWS3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RFX6Q8HWS3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.99■□□□□ 0.15
RFX6Q8HWS3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 AC009477.1-201ENST00000452936 217 ntBASIC15.99■□□□□ 0.15
RFX6Q8HWS3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 AC009407.1-201ENST00000568958 598 ntBASIC15.99■□□□□ 0.15
RFX6Q8HWS3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 AC106028.4-201ENST00000614509 607 ntBASIC15.99■□□□□ 0.15
RFX6Q8HWS3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 REXO1L4P-201ENST00000605109 1937 ntBASIC15.99■□□□□ 0.15
RFX6Q8HWS3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RFX6Q8HWS3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 AC012508.2-201ENST00000567613 1472 ntBASIC15.98■□□□□ 0.15
RFX6Q8HWS3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms