Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 AL645728.2-202ENST00000641679 227 ntBASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.36□□□□□ -0.27
LRRTM1Q86UE6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AL353705.2-201ENST00000428243 662 ntBASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 TIMM8BP1-201ENST00000452384 211 ntBASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 AC007787.1-201ENST00000588095 1583 ntBASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRTM1Q86UE6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms