Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 RPL5P21-201ENST00000404620 815 ntBASIC12.82□□□□□ -0.36
ZNF546Q86UE3 ELK2BP-201ENST00000415014 1224 ntBASIC12.82□□□□□ -0.36
ZNF546Q86UE3 GPX1P2-201ENST00000429271 606 ntBASIC12.82□□□□□ -0.36
ZNF546Q86UE3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 SCARNA2-201ENST00000458748 420 ntBASIC12.82□□□□□ -0.36
ZNF546Q86UE3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 AP000550.4-202ENST00000639755 178 ntBASIC12.82□□□□□ -0.36
ZNF546Q86UE3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 AC015909.5-201ENST00000624336 2266 ntBASIC12.82□□□□□ -0.36
ZNF546Q86UE3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF546Q86UE3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 CICP11-201ENST00000434745 2827 ntBASIC12.81□□□□□ -0.36
ZNF546Q86UE3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 AC092119.3-201ENST00000612618 583 ntBASIC12.81□□□□□ -0.36
ZNF546Q86UE3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 AC118758.2-201ENST00000614242 2813 ntBASIC12.81□□□□□ -0.36
ZNF546Q86UE3 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.81□□□□□ -0.36
ZNF546Q86UE3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ZNF546Q86UE3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF546Q86UE3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms