Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DENND1BQ6P3S1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DENND1BQ6P3S1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
DENND1BQ6P3S1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
DENND1BQ6P3S1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
DENND1BQ6P3S1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
DENND1BQ6P3S1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
DENND1BQ6P3S1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
DENND1BQ6P3S1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
DENND1BQ6P3S1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
DENND1BQ6P3S1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.21■□□□□ 0.18
DENND1BQ6P3S1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 AC068587.6-202ENST00000641839 5619 ntBASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 CLUHP6-201ENST00000580789 941 ntBASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 CU634019.7-201ENST00000624153 1185 ntBASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 FP236241.2-201ENST00000624906 1185 ntBASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 AC025048.6-201ENST00000634326 1161 ntBASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.2■□□□□ 0.18
DENND1BQ6P3S1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 LILRP1-201ENST00000444199 1370 ntBASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 RNU1-114P-201ENST00000365297 166 ntBASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 AP005018.1-201ENST00000525475 301 ntBASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 RPSAP52-203ENST00000622976 1023 ntBASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 AL033527.5-201ENST00000641382 801 ntBASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 PRSS30P-206ENST00000641773 873 ntBASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.19■□□□□ 0.18
DENND1BQ6P3S1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms