Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 BASP1P1-201ENST00000430708 665 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 AL512638.1-201ENST00000457493 794 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 TPRX2P-201ENST00000535362 881 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 AC023310.3-201ENST00000557027 670 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 AC100756.1-201ENST00000562736 682 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 AC138749.3-201ENST00000567691 622 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 AC116165.1-201ENST00000611806 668 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 AC004790.1-201ENST00000612686 536 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.89■□□□□ 0.13
LRRC38Q5VT99 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC38Q5VT99 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 AC113367.3-201ENST00000508316 1912 ntBASIC15.88■□□□□ 0.13
LRRC38Q5VT99 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 AC026748.1-201ENST00000624349 3251 ntBASIC15.88■□□□□ 0.13
LRRC38Q5VT99 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 BRI3BPP1-201ENST00000594224 787 ntBASIC15.88■□□□□ 0.13
LRRC38Q5VT99 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRC38Q5VT99 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 VDAC1P7-201ENST00000462417 847 ntBASIC15.87■□□□□ 0.13
LRRC38Q5VT99 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRC38Q5VT99 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms