Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 AC008723.1-201ENST00000506922 207 ntBASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 PTK2-225ENST00000520892 571 ntTSL 4 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 DNM1P30-201ENST00000563586 452 ntBASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 MIR6756-201ENST00000616240 63 ntBASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPAQ5VT25 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC22.52■■□□□ 1.19
CDC42BPAQ5VT25 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CDC42BPAQ5VT25 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 MIR4649-201ENST00000582839 64 ntBASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AC073911.3-201ENST00000624401 631 ntBASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AP003680.1-201ENST00000598970 3660 ntBASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 KRT18P9-201ENST00000604826 1300 ntBASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AL627231.1-201ENST00000394467 1125 ntBASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 TSPY25P-201ENST00000429463 745 ntBASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPAQ5VT25 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 AC005041.3-201ENST00000606287 649 ntBASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPAQ5VT25 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms