Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PUDPQ08623 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.08□□□□□ -0.16
PUDPQ08623 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PUDPQ08623 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PUDPQ08623 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PUDPQ08623 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PUDPQ08623 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.08□□□□□ -0.16
PUDPQ08623 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
PUDPQ08623 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PUDPQ08623 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.08□□□□□ -0.16
PUDPQ08623 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PUDPQ08623 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PUDPQ08623 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PUDPQ08623 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PUDPQ08623 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
PUDPQ08623 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PUDPQ08623 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PUDPQ08623 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.07□□□□□ -0.16
PUDPQ08623 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.07□□□□□ -0.16
PUDPQ08623 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PUDPQ08623 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.07□□□□□ -0.16
PUDPQ08623 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PUDPQ08623 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PUDPQ08623 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.07□□□□□ -0.16
PUDPQ08623 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.07□□□□□ -0.16
PUDPQ08623 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.07□□□□□ -0.16
PUDPQ08623 AC010336.2-201ENST00000564226 506 ntBASIC14.07□□□□□ -0.16
PUDPQ08623 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.07□□□□□ -0.16
PUDPQ08623 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.07□□□□□ -0.16
PUDPQ08623 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.07□□□□□ -0.16
PUDPQ08623 AC074044.1-201ENST00000609673 707 ntBASIC14.07□□□□□ -0.16
PUDPQ08623 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.07□□□□□ -0.16
PUDPQ08623 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PUDPQ08623 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.07□□□□□ -0.16
PUDPQ08623 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PUDPQ08623 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.07□□□□□ -0.16
PUDPQ08623 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PUDPQ08623 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.07□□□□□ -0.16
PUDPQ08623 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
PUDPQ08623 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.07□□□□□ -0.16
PUDPQ08623 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
PUDPQ08623 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PUDPQ08623 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 LINC00528-201ENST00000600723 2160 ntBASIC14.06□□□□□ -0.16
PUDPQ08623 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.06□□□□□ -0.16
PUDPQ08623 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.06□□□□□ -0.16
PUDPQ08623 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
PUDPQ08623 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.06□□□□□ -0.16
PUDPQ08623 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.06□□□□□ -0.16
PUDPQ08623 AC074338.1-201ENST00000416825 156 ntBASIC14.06□□□□□ -0.16
PUDPQ08623 TREML5P-201ENST00000421694 576 ntBASIC14.06□□□□□ -0.16
PUDPQ08623 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.06□□□□□ -0.16
PUDPQ08623 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.06□□□□□ -0.16
PUDPQ08623 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PUDPQ08623 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.06□□□□□ -0.16
PUDPQ08623 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.06□□□□□ -0.16
PUDPQ08623 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.06□□□□□ -0.16
PUDPQ08623 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.06□□□□□ -0.16
PUDPQ08623 AC006538.3-201ENST00000612495 578 ntBASIC14.06□□□□□ -0.16
PUDPQ08623 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms