Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.06□□□□□ -0.16
LTBQ06643 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.06□□□□□ -0.16
LTBQ06643 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.06□□□□□ -0.16
LTBQ06643 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.06□□□□□ -0.16
LTBQ06643 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LTBQ06643 AC138969.3-201ENST00000546612 1459 ntBASIC14.06□□□□□ -0.16
LTBQ06643 AC138932.2-201ENST00000548268 1459 ntBASIC14.06□□□□□ -0.16
LTBQ06643 AC126755.4-201ENST00000549796 1459 ntBASIC14.06□□□□□ -0.16
LTBQ06643 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
LTBQ06643 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.05□□□□□ -0.16
LTBQ06643 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.05□□□□□ -0.16
LTBQ06643 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.05□□□□□ -0.16
LTBQ06643 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
LTBQ06643 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
LTBQ06643 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.05□□□□□ -0.16
LTBQ06643 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.05□□□□□ -0.16
LTBQ06643 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
LTBQ06643 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
LTBQ06643 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.05□□□□□ -0.16
LTBQ06643 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.05□□□□□ -0.16
LTBQ06643 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.05□□□□□ -0.16
LTBQ06643 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 AC009407.1-201ENST00000568958 598 ntBASIC14.05□□□□□ -0.16
LTBQ06643 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.05□□□□□ -0.16
LTBQ06643 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LTBQ06643 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LTBQ06643 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LTBQ06643 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LTBQ06643 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.04□□□□□ -0.16
LTBQ06643 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LTBQ06643 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.04□□□□□ -0.16
LTBQ06643 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.04□□□□□ -0.16
LTBQ06643 MIR658-201ENST00000385210 100 ntBASIC14.04□□□□□ -0.16
LTBQ06643 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.04□□□□□ -0.16
LTBQ06643 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.04□□□□□ -0.16
LTBQ06643 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.04□□□□□ -0.16
LTBQ06643 AC009477.1-201ENST00000452936 217 ntBASIC14.04□□□□□ -0.16
LTBQ06643 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LTBQ06643 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBQ06643 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.04□□□□□ -0.16
LTBQ06643 ZNF890P-202ENST00000530367 1156 ntBASIC14.04□□□□□ -0.16
LTBQ06643 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.04□□□□□ -0.16
LTBQ06643 TP53TG3HP-202ENST00000569755 579 ntBASIC14.04□□□□□ -0.16
LTBQ06643 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.04□□□□□ -0.16
LTBQ06643 AC004461.2-201ENST00000629517 803 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms