Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 ALG1L8P-201ENST00000533887 760 ntBASIC11.84□□□□□ -0.51
HIST1H1AQ02539 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 MIR3687-2-201ENST00000577708 61 ntBASIC11.84□□□□□ -0.51
HIST1H1AQ02539 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 MIR4469-201ENST00000583919 79 ntBASIC11.84□□□□□ -0.51
HIST1H1AQ02539 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 AC003101.2-201ENST00000612557 442 ntBASIC11.84□□□□□ -0.51
HIST1H1AQ02539 MIR3687-1-201ENST00000614492 61 ntBASIC11.84□□□□□ -0.51
HIST1H1AQ02539 AC105339.1-204ENST00000636249 355 ntBASIC11.84□□□□□ -0.51
HIST1H1AQ02539 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
HIST1H1AQ02539 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
HIST1H1AQ02539 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 AL731571.1-201ENST00000617058 5428 ntBASIC11.83□□□□□ -0.52
HIST1H1AQ02539 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.83□□□□□ -0.52
HIST1H1AQ02539 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms