Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.98□□□□□ -0.17
CACNA1BQ00975 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CACNA1BQ00975 ACTG1P19-201ENST00000418987 1116 ntBASIC13.98□□□□□ -0.17
CACNA1BQ00975 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.98□□□□□ -0.17
CACNA1BQ00975 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.98□□□□□ -0.17
CACNA1BQ00975 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.98□□□□□ -0.17
CACNA1BQ00975 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.98□□□□□ -0.17
CACNA1BQ00975 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.98□□□□□ -0.17
CACNA1BQ00975 AC068831.5-201ENST00000557387 328 ntBASIC13.98□□□□□ -0.17
CACNA1BQ00975 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.98□□□□□ -0.17
CACNA1BQ00975 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CACNA1BQ00975 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.98□□□□□ -0.17
CACNA1BQ00975 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.98□□□□□ -0.17
CACNA1BQ00975 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 TPT1P6-201ENST00000458298 514 ntBASIC13.97□□□□□ -0.17
CACNA1BQ00975 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 TREHP1-201ENST00000531328 465 ntBASIC13.97□□□□□ -0.17
CACNA1BQ00975 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AC010632.2-201ENST00000588369 1224 ntBASIC13.97□□□□□ -0.17
CACNA1BQ00975 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AC002044.2-201ENST00000624910 970 ntBASIC13.97□□□□□ -0.17
CACNA1BQ00975 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AL807761.2-201ENST00000422849 729 ntBASIC13.97□□□□□ -0.17
CACNA1BQ00975 DUTP3-201ENST00000450025 415 ntBASIC13.97□□□□□ -0.17
CACNA1BQ00975 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 FTH1P22-201ENST00000456305 520 ntBASIC13.97□□□□□ -0.17
CACNA1BQ00975 KRT127P-201ENST00000547183 433 ntBASIC13.97□□□□□ -0.17
CACNA1BQ00975 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AC008536.3-201ENST00000623282 1599 ntBASIC13.97□□□□□ -0.17
CACNA1BQ00975 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.97□□□□□ -0.17
CACNA1BQ00975 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 TSPY25P-201ENST00000429463 745 ntBASIC13.96□□□□□ -0.17
CACNA1BQ00975 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 GOLGA2P7-209ENST00000560408 745 ntBASIC13.96□□□□□ -0.17
CACNA1BQ00975 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 SIGLEC18P-201ENST00000602271 909 ntBASIC13.96□□□□□ -0.17
CACNA1BQ00975 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CACNA1BQ00975 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CACNA1BQ00975 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms