Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.24□□□□□ -0.61
APOC4P55056 AL513477.1-201ENST00000602865 2407 ntBASIC11.24□□□□□ -0.61
APOC4P55056 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.24□□□□□ -0.61
APOC4P55056 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
APOC4P55056 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 CICP13-201ENST00000422015 2789 ntBASIC11.23□□□□□ -0.61
APOC4P55056 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
APOC4P55056 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
APOC4P55056 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
APOC4P55056 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
APOC4P55056 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.23□□□□□ -0.61
APOC4P55056 AL139094.1-201ENST00000405549 1188 ntBASIC11.23□□□□□ -0.61
APOC4P55056 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.23□□□□□ -0.61
APOC4P55056 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
APOC4P55056 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.23□□□□□ -0.61
APOC4P55056 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.23□□□□□ -0.61
APOC4P55056 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.23□□□□□ -0.61
APOC4P55056 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.23□□□□□ -0.61
APOC4P55056 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 KRT90P-201ENST00000549264 1064 ntBASIC11.23□□□□□ -0.61
APOC4P55056 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 AC025279.2-201ENST00000569730 653 ntBASIC11.23□□□□□ -0.61
APOC4P55056 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.23□□□□□ -0.61
APOC4P55056 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.23□□□□□ -0.61
APOC4P55056 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 AC132938.4-201ENST00000623835 848 ntBASIC11.23□□□□□ -0.61
APOC4P55056 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 AC007787.1-201ENST00000588095 1583 ntBASIC11.23□□□□□ -0.61
APOC4P55056 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.23□□□□□ -0.61
APOC4P55056 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
APOC4P55056 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.23□□□□□ -0.61
APOC4P55056 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
APOC4P55056 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
APOC4P55056 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
APOC4P55056 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.22□□□□□ -0.61
APOC4P55056 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
APOC4P55056 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 TPM3P8-201ENST00000330554 643 ntBASIC11.22□□□□□ -0.61
APOC4P55056 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
APOC4P55056 RNU1-114P-201ENST00000365297 166 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms