Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.78■□□□□ 0.12
ITGA8P53708 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ITGA8P53708 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ITGA8P53708 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ITGA8P53708 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.78■□□□□ 0.12
ITGA8P53708 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.78■□□□□ 0.12
ITGA8P53708 UPF3AP3-201ENST00000420996 769 ntBASIC15.78■□□□□ 0.12
ITGA8P53708 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.78■□□□□ 0.12
ITGA8P53708 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.78■□□□□ 0.12
ITGA8P53708 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
ITGA8P53708 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.78■□□□□ 0.12
ITGA8P53708 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.78■□□□□ 0.12
ITGA8P53708 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.78■□□□□ 0.12
ITGA8P53708 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ITGA8P53708 AF228730.6-201ENST00000641497 218 ntBASIC15.78■□□□□ 0.12
ITGA8P53708 AL645728.2-202ENST00000641679 227 ntBASIC15.78■□□□□ 0.12
ITGA8P53708 AC084121.3-201ENST00000641716 218 ntBASIC15.78■□□□□ 0.12
ITGA8P53708 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ITGA8P53708 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ITGA8P53708 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
ITGA8P53708 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.78■□□□□ 0.12
ITGA8P53708 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
ITGA8P53708 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.78■□□□□ 0.12
ITGA8P53708 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ITGA8P53708 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.77■□□□□ 0.12
ITGA8P53708 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.77■□□□□ 0.12
ITGA8P53708 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.77■□□□□ 0.12
ITGA8P53708 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
ITGA8P53708 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ITGA8P53708 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ITGA8P53708 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.77■□□□□ 0.12
ITGA8P53708 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
ITGA8P53708 RPSAP43-201ENST00000402237 625 ntBASIC15.77■□□□□ 0.12
ITGA8P53708 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.77■□□□□ 0.12
ITGA8P53708 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
ITGA8P53708 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.77■□□□□ 0.12
ITGA8P53708 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ITGA8P53708 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.77■□□□□ 0.12
ITGA8P53708 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.77■□□□□ 0.12
ITGA8P53708 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ITGA8P53708 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.77■□□□□ 0.12
ITGA8P53708 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.77■□□□□ 0.12
ITGA8P53708 MIR4453-201ENST00000584019 89 ntBASIC15.77■□□□□ 0.12
ITGA8P53708 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITGA8P53708 MIR6069-201ENST00000620069 79 ntBASIC15.77■□□□□ 0.12
ITGA8P53708 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
ITGA8P53708 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.77■□□□□ 0.11
ITGA8P53708 AC007787.1-201ENST00000588095 1583 ntBASIC15.77■□□□□ 0.11
ITGA8P53708 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ITGA8P53708 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ITGA8P53708 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ITGA8P53708 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.77■□□□□ 0.11
ITGA8P53708 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ITGA8P53708 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.77■□□□□ 0.11
ITGA8P53708 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ITGA8P53708 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.77■□□□□ 0.11
ITGA8P53708 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ITGA8P53708 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
ITGA8P53708 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
ITGA8P53708 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
ITGA8P53708 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.76■□□□□ 0.11
ITGA8P53708 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.76■□□□□ 0.11
ITGA8P53708 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ITGA8P53708 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.76■□□□□ 0.11
ITGA8P53708 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ITGA8P53708 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms