Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.5■□□□□ 0.07
LIMK2P53671 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LIMK2P53671 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.5■□□□□ 0.07
LIMK2P53671 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.5■□□□□ 0.07
LIMK2P53671 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LIMK2P53671 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LIMK2P53671 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.49■□□□□ 0.07
LIMK2P53671 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.49■□□□□ 0.07
LIMK2P53671 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LIMK2P53671 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.49■□□□□ 0.07
LIMK2P53671 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LIMK2P53671 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.49■□□□□ 0.07
LIMK2P53671 DGCR5-201ENST00000399539 862 ntBASIC15.49■□□□□ 0.07
LIMK2P53671 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.49■□□□□ 0.07
LIMK2P53671 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.49■□□□□ 0.07
LIMK2P53671 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.49■□□□□ 0.07
LIMK2P53671 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.49■□□□□ 0.07
LIMK2P53671 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.49■□□□□ 0.07
LIMK2P53671 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.49■□□□□ 0.07
LIMK2P53671 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.49■□□□□ 0.07
LIMK2P53671 AC025048.3-201ENST00000590609 569 ntBASIC15.49■□□□□ 0.07
LIMK2P53671 AC005702.4-201ENST00000618393 416 ntBASIC15.49■□□□□ 0.07
LIMK2P53671 AL109936.8-201ENST00000641772 604 ntBASIC15.49■□□□□ 0.07
LIMK2P53671 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LIMK2P53671 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 AC007191.1-201ENST00000623179 2995 ntBASIC15.49■□□□□ 0.07
LIMK2P53671 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.49■□□□□ 0.07
LIMK2P53671 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 SLC7A15P-201ENST00000424028 1363 ntBASIC15.49■□□□□ 0.07
LIMK2P53671 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LIMK2P53671 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.48■□□□□ 0.07
LIMK2P53671 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.48■□□□□ 0.07
LIMK2P53671 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.48■□□□□ 0.07
LIMK2P53671 CICP14-201ENST00000629111 2732 ntBASIC15.48■□□□□ 0.07
LIMK2P53671 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
LIMK2P53671 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LIMK2P53671 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.48■□□□□ 0.07
LIMK2P53671 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
LIMK2P53671 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 AL133267.1-201ENST00000398220 340 ntBASIC15.48■□□□□ 0.07
LIMK2P53671 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.48■□□□□ 0.07
LIMK2P53671 MEP1AP4-201ENST00000423244 1087 ntBASIC15.48■□□□□ 0.07
LIMK2P53671 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.48■□□□□ 0.07
LIMK2P53671 KRT18P64-201ENST00000434946 1219 ntBASIC15.48■□□□□ 0.07
LIMK2P53671 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.48■□□□□ 0.07
LIMK2P53671 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.48■□□□□ 0.07
LIMK2P53671 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.48■□□□□ 0.07
LIMK2P53671 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.48■□□□□ 0.07
LIMK2P53671 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.48■□□□□ 0.07
LIMK2P53671 AC055876.2-201ENST00000531834 546 ntBASIC15.48■□□□□ 0.07
LIMK2P53671 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.48■□□□□ 0.07
LIMK2P53671 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LIMK2P53671 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.48■□□□□ 0.07
LIMK2P53671 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.48■□□□□ 0.07
LIMK2P53671 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.48■□□□□ 0.07
LIMK2P53671 CHCHD2P3-201ENST00000603038 451 ntBASIC15.48■□□□□ 0.07
LIMK2P53671 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.48■□□□□ 0.07
LIMK2P53671 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.48■□□□□ 0.07
LIMK2P53671 AC026748.1-201ENST00000624349 3251 ntBASIC15.48■□□□□ 0.07
LIMK2P53671 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms