Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TNFSF9P41273 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFSF9P41273 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TNFSF9P41273 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.53■□□□□ 0.24
TNFSF9P41273 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.53■□□□□ 0.24
TNFSF9P41273 FAM197Y7-201ENST00000432892 766 ntBASIC16.53■□□□□ 0.24
TNFSF9P41273 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFSF9P41273 AC104989.1-201ENST00000519711 778 ntBASIC16.53■□□□□ 0.24
TNFSF9P41273 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.53■□□□□ 0.24
TNFSF9P41273 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFSF9P41273 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.53■□□□□ 0.24
TNFSF9P41273 AC104640.1-201ENST00000562617 2109 ntBASIC16.53■□□□□ 0.24
TNFSF9P41273 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFSF9P41273 AC004466.1-201ENST00000599515 1080 ntBASIC16.53■□□□□ 0.24
TNFSF9P41273 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TNFSF9P41273 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFSF9P41273 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TNFSF9P41273 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TNFSF9P41273 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.53■□□□□ 0.24
TNFSF9P41273 AC055811.4-201ENST00000624039 1754 ntBASIC16.53■□□□□ 0.24
TNFSF9P41273 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TNFSF9P41273 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TNFSF9P41273 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFSF9P41273 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFSF9P41273 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 BOLA2P3-201ENST00000404566 256 ntBASIC16.52■□□□□ 0.24
TNFSF9P41273 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TNFSF9P41273 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFSF9P41273 RPL7P3-201ENST00000441388 714 ntBASIC16.52■□□□□ 0.24
TNFSF9P41273 KLF2P4-201ENST00000451959 1225 ntBASIC16.52■□□□□ 0.24
TNFSF9P41273 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
TNFSF9P41273 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 AC022616.1-201ENST00000518688 554 ntBASIC16.52■□□□□ 0.24
TNFSF9P41273 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFSF9P41273 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.52■□□□□ 0.24
TNFSF9P41273 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.52■□□□□ 0.24
TNFSF9P41273 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TNFSF9P41273 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.52■□□□□ 0.24
TNFSF9P41273 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.52■□□□□ 0.24
TNFSF9P41273 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TNFSF9P41273 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNFSF9P41273 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNFSF9P41273 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TNFSF9P41273 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TNFSF9P41273 AP002414.2-201ENST00000591780 3365 ntBASIC16.52■□□□□ 0.23
TNFSF9P41273 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TNFSF9P41273 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.52■□□□□ 0.23
TNFSF9P41273 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TNFSF9P41273 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.51■□□□□ 0.23
TNFSF9P41273 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.51■□□□□ 0.23
TNFSF9P41273 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TNFSF9P41273 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFSF9P41273 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 AC023157.3-201ENST00000619086 2088 ntBASIC16.51■□□□□ 0.23
TNFSF9P41273 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TNFSF9P41273 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.51■□□□□ 0.23
TNFSF9P41273 C2orf27AP3-201ENST00000434123 579 ntBASIC16.51■□□□□ 0.23
TNFSF9P41273 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.51■□□□□ 0.23
TNFSF9P41273 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TNFSF9P41273 AC078819.1-201ENST00000547454 765 ntBASIC16.51■□□□□ 0.23
TNFSF9P41273 AC012085.1-201ENST00000548270 765 ntBASIC16.51■□□□□ 0.23
TNFSF9P41273 DUX4L47-201ENST00000566374 394 ntBASIC16.51■□□□□ 0.23
TNFSF9P41273 ECM1P1-201ENST00000604092 1279 ntBASIC16.51■□□□□ 0.23
TNFSF9P41273 MIR6805-201ENST00000615055 62 ntBASIC16.51■□□□□ 0.23
TNFSF9P41273 AL354718.3-201ENST00000616414 581 ntBASIC16.51■□□□□ 0.23
TNFSF9P41273 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.51■□□□□ 0.23
TNFSF9P41273 CR382287.1-201ENST00000623954 586 ntBASIC16.51■□□□□ 0.23
TNFSF9P41273 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TNFSF9P41273 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNFSF9P41273 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TNFSF9P41273 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.51■□□□□ 0.23
TNFSF9P41273 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFSF9P41273 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.51■□□□□ 0.23
TNFSF9P41273 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
TNFSF9P41273 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TNFSF9P41273 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms