Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SNCAP37840 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNCAP37840 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SNCAP37840 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.71□□□□□ -0.38
SNCAP37840 AC027612.1-201ENST00000445234 2395 ntBASIC12.71□□□□□ -0.38
SNCAP37840 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SNCAP37840 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNCAP37840 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
SNCAP37840 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNCAP37840 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SNCAP37840 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNCAP37840 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNCAP37840 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNCAP37840 AL691432.1-201ENST00000596308 1422 ntBASIC12.71□□□□□ -0.38
SNCAP37840 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SNCAP37840 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 AC023024.2-201ENST00000623561 1993 ntBASIC12.7□□□□□ -0.38
SNCAP37840 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.7□□□□□ -0.38
SNCAP37840 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.7□□□□□ -0.38
SNCAP37840 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.7□□□□□ -0.38
SNCAP37840 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SNCAP37840 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 AC099521.3-201ENST00000624251 2938 ntBASIC12.7□□□□□ -0.38
SNCAP37840 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SNCAP37840 AL356585.2-201ENST00000625078 2396 ntBASIC12.7□□□□□ -0.38
SNCAP37840 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.7□□□□□ -0.38
SNCAP37840 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.7□□□□□ -0.38
SNCAP37840 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SNCAP37840 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SNCAP37840 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SNCAP37840 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.7□□□□□ -0.38
SNCAP37840 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 RNA5SP419-201ENST00000515908 135 ntBASIC12.7□□□□□ -0.38
SNCAP37840 RNA5SP410-201ENST00000516285 106 ntBASIC12.7□□□□□ -0.38
SNCAP37840 RNA5SP416-201ENST00000516838 111 ntBASIC12.7□□□□□ -0.38
SNCAP37840 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.7□□□□□ -0.38
SNCAP37840 AC145285.3-201ENST00000564603 959 ntBASIC12.7□□□□□ -0.38
SNCAP37840 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.7□□□□□ -0.38
SNCAP37840 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.7□□□□□ -0.38
SNCAP37840 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SNCAP37840 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SNCAP37840 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.7□□□□□ -0.38
SNCAP37840 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.7□□□□□ -0.38
SNCAP37840 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.7□□□□□ -0.38
SNCAP37840 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
SNCAP37840 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNCAP37840 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 ZNF259P1-201ENST00000407656 1365 ntBASIC12.69□□□□□ -0.38
SNCAP37840 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.69□□□□□ -0.38
SNCAP37840 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.69□□□□□ -0.38
SNCAP37840 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 HLA-A-201ENST00000376802 1334 ntBASIC12.69□□□□□ -0.38
SNCAP37840 AKAP8P1-201ENST00000434743 1349 ntBASIC12.69□□□□□ -0.38
SNCAP37840 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
SNCAP37840 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SNCAP37840 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNCAP37840 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms