Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CIITAP33076 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CIITAP33076 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.19■□□□□ 0.34
CIITAP33076 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CIITAP33076 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.19■□□□□ 0.34
CIITAP33076 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.18■□□□□ 0.34
CIITAP33076 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.18■□□□□ 0.34
CIITAP33076 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.18■□□□□ 0.34
CIITAP33076 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CIITAP33076 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CIITAP33076 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.18■□□□□ 0.34
CIITAP33076 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CIITAP33076 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.18■□□□□ 0.34
CIITAP33076 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.18■□□□□ 0.34
CIITAP33076 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.18■□□□□ 0.34
CIITAP33076 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.18■□□□□ 0.34
CIITAP33076 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.18■□□□□ 0.34
CIITAP33076 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.18■□□□□ 0.34
CIITAP33076 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CIITAP33076 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.18■□□□□ 0.34
CIITAP33076 AC245100.3-201ENST00000441281 285 ntBASIC17.18■□□□□ 0.34
CIITAP33076 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.18■□□□□ 0.34
CIITAP33076 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.18■□□□□ 0.34
CIITAP33076 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.18■□□□□ 0.34
CIITAP33076 AC078819.1-201ENST00000547454 765 ntBASIC17.18■□□□□ 0.34
CIITAP33076 AC012085.1-201ENST00000548270 765 ntBASIC17.18■□□□□ 0.34
CIITAP33076 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.18■□□□□ 0.34
CIITAP33076 RHOXF1P1-202ENST00000635473 501 ntBASIC17.18■□□□□ 0.34
CIITAP33076 COX11-210ENST00000639671 696 ntBASIC17.18■□□□□ 0.34
CIITAP33076 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CIITAP33076 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CIITAP33076 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CIITAP33076 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CIITAP33076 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CIITAP33076 AC091951.1-201ENST00000512854 2465 ntBASIC17.18■□□□□ 0.34
CIITAP33076 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.17■□□□□ 0.34
CIITAP33076 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CIITAP33076 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CIITAP33076 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.17■□□□□ 0.34
CIITAP33076 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.17■□□□□ 0.34
CIITAP33076 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 FO681548.1-201ENST00000455617 1132 ntBASIC17.17■□□□□ 0.34
CIITAP33076 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.17■□□□□ 0.34
CIITAP33076 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 AC004466.1-201ENST00000599515 1080 ntBASIC17.17■□□□□ 0.34
CIITAP33076 AL359881.2-201ENST00000602973 570 ntBASIC17.17■□□□□ 0.34
CIITAP33076 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CIITAP33076 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CIITAP33076 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.17■□□□□ 0.34
CIITAP33076 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CIITAP33076 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CIITAP33076 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CIITAP33076 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CIITAP33076 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CIITAP33076 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.16■□□□□ 0.34
CIITAP33076 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CIITAP33076 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CIITAP33076 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CIITAP33076 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CIITAP33076 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms