Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA3P32297 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CHRNA3P32297 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CHRNA3P32297 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
CHRNA3P32297 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA3P32297 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CHRNA3P32297 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.21■□□□□ 0.19
CHRNA3P32297 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA3P32297 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA3P32297 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CHRNA3P32297 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CHRNA3P32297 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA3P32297 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.21■□□□□ 0.19
CHRNA3P32297 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.21■□□□□ 0.19
CHRNA3P32297 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA3P32297 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.21■□□□□ 0.19
CHRNA3P32297 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.21■□□□□ 0.19
CHRNA3P32297 SDHAP3-202ENST00000515467 728 ntBASIC16.21■□□□□ 0.19
CHRNA3P32297 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA3P32297 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA3P32297 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.21■□□□□ 0.19
CHRNA3P32297 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.21■□□□□ 0.19
CHRNA3P32297 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA3P32297 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.21■□□□□ 0.19
CHRNA3P32297 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.21■□□□□ 0.19
CHRNA3P32297 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CHRNA3P32297 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA3P32297 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA3P32297 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHRNA3P32297 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CHRNA3P32297 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHRNA3P32297 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.21■□□□□ 0.18
CHRNA3P32297 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 REXO1L2P-201ENST00000425429 2069 ntBASIC16.2■□□□□ 0.18
CHRNA3P32297 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHRNA3P32297 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA3P32297 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHRNA3P32297 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CHRNA3P32297 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA3P32297 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CHRNA3P32297 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CHRNA3P32297 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 PIN1P1-201ENST00000412108 996 ntBASIC16.2■□□□□ 0.18
CHRNA3P32297 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRNA3P32297 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CHRNA3P32297 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA3P32297 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.2■□□□□ 0.18
CHRNA3P32297 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CHRNA3P32297 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.2■□□□□ 0.18
CHRNA3P32297 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA3P32297 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.2■□□□□ 0.18
CHRNA3P32297 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.2■□□□□ 0.18
CHRNA3P32297 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.2■□□□□ 0.18
CHRNA3P32297 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.2■□□□□ 0.18
CHRNA3P32297 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.2■□□□□ 0.18
CHRNA3P32297 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.2■□□□□ 0.18
CHRNA3P32297 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA3P32297 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA3P32297 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
CHRNA3P32297 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CHRNA3P32297 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA3P32297 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA3P32297 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNA3P32297 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHRNA3P32297 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms