Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HOXC9P31274 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC9P31274 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC9P31274 AC138932.1-201ENST00000534164 6830 ntBASIC20.01■□□□□ 0.79
HOXC9P31274 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXC9P31274 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 AC006058.4-201ENST00000624016 1670 ntBASIC20■□□□□ 0.79
HOXC9P31274 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20■□□□□ 0.79
HOXC9P31274 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20■□□□□ 0.79
HOXC9P31274 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
HOXC9P31274 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20■□□□□ 0.79
HOXC9P31274 DOC2GP-204ENST00000639052 2548 ntBASIC20■□□□□ 0.79
HOXC9P31274 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20■□□□□ 0.79
HOXC9P31274 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC20■□□□□ 0.79
HOXC9P31274 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20■□□□□ 0.79
HOXC9P31274 AC007274.2-201ENST00000421675 662 ntBASIC20■□□□□ 0.79
HOXC9P31274 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC20■□□□□ 0.79
HOXC9P31274 AL596276.2-201ENST00000447525 331 ntBASIC20■□□□□ 0.79
HOXC9P31274 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC20■□□□□ 0.79
HOXC9P31274 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
HOXC9P31274 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC20■□□□□ 0.79
HOXC9P31274 AC103988.2-201ENST00000561804 725 ntBASIC20■□□□□ 0.79
HOXC9P31274 MIR4722-201ENST00000578292 60 ntBASIC20■□□□□ 0.79
HOXC9P31274 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC20■□□□□ 0.79
HOXC9P31274 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
HOXC9P31274 AC128714.1-201ENST00000637035 887 ntBASIC20■□□□□ 0.79
HOXC9P31274 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC20■□□□□ 0.79
HOXC9P31274 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20■□□□□ 0.79
HOXC9P31274 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20■□□□□ 0.79
HOXC9P31274 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20■□□□□ 0.79
HOXC9P31274 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20■□□□□ 0.79
HOXC9P31274 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.99■□□□□ 0.79
HOXC9P31274 AC112693.3-201ENST00000624819 1983 ntBASIC19.99■□□□□ 0.79
HOXC9P31274 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC9P31274 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HOXC9P31274 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC9P31274 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HOXC9P31274 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXC9P31274 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.99■□□□□ 0.79
HOXC9P31274 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.99■□□□□ 0.79
HOXC9P31274 AC009779.1-201ENST00000551138 283 ntBASIC19.99■□□□□ 0.79
HOXC9P31274 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.99■□□□□ 0.79
HOXC9P31274 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.99■□□□□ 0.79
HOXC9P31274 AL132994.2-201ENST00000603120 687 ntBASIC19.99■□□□□ 0.79
HOXC9P31274 AP000346.4-201ENST00000614827 381 ntBASIC19.99■□□□□ 0.79
HOXC9P31274 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.99■□□□□ 0.79
HOXC9P31274 Z98259.2-201ENST00000641583 609 ntBASIC19.99■□□□□ 0.79
HOXC9P31274 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 AL157791.1-201ENST00000553667 1699 ntBASIC19.99■□□□□ 0.79
HOXC9P31274 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
HOXC9P31274 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXC9P31274 AC023090.2-201ENST00000625182 2110 ntBASIC19.99■□□□□ 0.79
HOXC9P31274 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
HOXC9P31274 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC9P31274 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC9P31274 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC9P31274 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC9P31274 MBLAC2-202ENST00000514906 1936 ntBASIC19.98■□□□□ 0.79
HOXC9P31274 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
HOXC9P31274 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC9P31274 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC9P31274 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC9P31274 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC9P31274 MIR33B-201ENST00000385104 96 ntBASIC19.98■□□□□ 0.79
HOXC9P31274 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HOXC9P31274 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.98■□□□□ 0.79
HOXC9P31274 FAM58BP-201ENST00000439056 645 ntBASIC19.98■□□□□ 0.79
HOXC9P31274 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.98■□□□□ 0.79
HOXC9P31274 TMEM198B-204ENST00000484016 896 ntBASIC19.98■□□□□ 0.79
HOXC9P31274 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.98■□□□□ 0.79
HOXC9P31274 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
HOXC9P31274 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms