Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 RPL13AP25-201ENST00000484130 612 ntBASIC15.64■□□□□ 0.09
PTPN3P26045 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.64■□□□□ 0.09
PTPN3P26045 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 SPCS2P1-201ENST00000561636 679 ntBASIC15.64■□□□□ 0.09
PTPN3P26045 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.64■□□□□ 0.09
PTPN3P26045 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PTPN3P26045 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN3P26045 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN3P26045 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PTPN3P26045 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PTPN3P26045 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.64■□□□□ 0.09
PTPN3P26045 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTPN3P26045 AL157414.3-201ENST00000624276 1954 ntBASIC15.64■□□□□ 0.09
PTPN3P26045 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
PTPN3P26045 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.64■□□□□ 0.09
PTPN3P26045 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN3P26045 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN3P26045 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN3P26045 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN3P26045 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN3P26045 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN3P26045 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PTPN3P26045 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN3P26045 DFFBP1-201ENST00000433250 979 ntBASIC15.63■□□□□ 0.09
PTPN3P26045 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.63■□□□□ 0.09
PTPN3P26045 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN3P26045 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.63■□□□□ 0.09
PTPN3P26045 AL132655.2-201ENST00000596276 594 ntBASIC15.63■□□□□ 0.09
PTPN3P26045 AL096865.1-201ENST00000606796 927 ntBASIC15.63■□□□□ 0.09
PTPN3P26045 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN3P26045 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
PTPN3P26045 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PTPN3P26045 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PTPN3P26045 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PTPN3P26045 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN3P26045 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PTPN3P26045 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
PTPN3P26045 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTPN3P26045 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.63■□□□□ 0.09
PTPN3P26045 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.63■□□□□ 0.09
PTPN3P26045 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.62■□□□□ 0.09
PTPN3P26045 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PTPN3P26045 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PTPN3P26045 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 INTS4P2-202ENST00000614726 2019 ntBASIC15.62■□□□□ 0.09
PTPN3P26045 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.62■□□□□ 0.09
PTPN3P26045 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PTPN3P26045 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.62■□□□□ 0.09
PTPN3P26045 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PTPN3P26045 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTPN3P26045 AC098850.1-201ENST00000419919 790 ntBASIC15.62■□□□□ 0.09
PTPN3P26045 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.62■□□□□ 0.09
PTPN3P26045 FAM207CP-201ENST00000443486 507 ntBASIC15.62■□□□□ 0.09
PTPN3P26045 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms