Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CD40P25942 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CD40P25942 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.2□□□□□ -0.3
CD40P25942 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40P25942 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40P25942 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.19□□□□□ -0.3
CD40P25942 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CD40P25942 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.19□□□□□ -0.3
CD40P25942 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.19□□□□□ -0.3
CD40P25942 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CD40P25942 MIR6799-201ENST00000620297 69 ntBASIC13.19□□□□□ -0.3
CD40P25942 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CD40P25942 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.19□□□□□ -0.3
CD40P25942 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CD40P25942 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.19□□□□□ -0.3
CD40P25942 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CD40P25942 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.19□□□□□ -0.3
CD40P25942 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40P25942 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.19□□□□□ -0.3
CD40P25942 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 REXO1L6P-201ENST00000603433 1515 ntBASIC13.18□□□□□ -0.3
CD40P25942 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 TUBB1P2-201ENST00000422712 1306 ntBASIC13.18□□□□□ -0.3
CD40P25942 AHCYP2-201ENST00000430630 1300 ntBASIC13.18□□□□□ -0.3
CD40P25942 TUBB1P1-201ENST00000503144 1300 ntBASIC13.18□□□□□ -0.3
CD40P25942 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CD40P25942 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.18□□□□□ -0.3
CD40P25942 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.18□□□□□ -0.3
CD40P25942 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.18□□□□□ -0.3
CD40P25942 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.18□□□□□ -0.3
CD40P25942 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40P25942 CD8B2-202ENST00000417670 633 ntBASIC13.18□□□□□ -0.3
CD40P25942 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.18□□□□□ -0.3
CD40P25942 GHSR-202ENST00000427970 912 ntBASIC13.18□□□□□ -0.3
CD40P25942 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.18□□□□□ -0.3
CD40P25942 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD40P25942 AL590640.2-201ENST00000457038 527 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms