Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LAMA1P25391 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LAMA1P25391 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LAMA1P25391 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LAMA1P25391 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.66□□□□□ -0.06
LAMA1P25391 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LAMA1P25391 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LAMA1P25391 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LAMA1P25391 AL357563.1-201ENST00000404728 395 ntBASIC14.66□□□□□ -0.06
LAMA1P25391 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.66□□□□□ -0.06
LAMA1P25391 AC027237.1-201ENST00000560942 655 ntBASIC14.66□□□□□ -0.06
LAMA1P25391 RN7SL596P-201ENST00000582123 288 ntBASIC14.66□□□□□ -0.06
LAMA1P25391 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LAMA1P25391 AC073911.3-201ENST00000624401 631 ntBASIC14.66□□□□□ -0.06
LAMA1P25391 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LAMA1P25391 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.66□□□□□ -0.06
LAMA1P25391 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.65□□□□□ -0.06
LAMA1P25391 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.65□□□□□ -0.06
LAMA1P25391 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
LAMA1P25391 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.65□□□□□ -0.06
LAMA1P25391 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.65□□□□□ -0.06
LAMA1P25391 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.65□□□□□ -0.06
LAMA1P25391 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
LAMA1P25391 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LAMA1P25391 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.65□□□□□ -0.06
LAMA1P25391 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.65□□□□□ -0.06
LAMA1P25391 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.65□□□□□ -0.06
LAMA1P25391 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.65□□□□□ -0.06
LAMA1P25391 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LAMA1P25391 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 AL627422.1-201ENST00000434104 580 ntBASIC14.65□□□□□ -0.06
LAMA1P25391 AL157792.1-201ENST00000488281 530 ntBASIC14.65□□□□□ -0.06
LAMA1P25391 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 MIR3677-201ENST00000578964 60 ntBASIC14.65□□□□□ -0.06
LAMA1P25391 MIR4522-201ENST00000584932 87 ntBASIC14.65□□□□□ -0.06
LAMA1P25391 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LAMA1P25391 RPL18AP3-201ENST00000462885 528 ntBASIC14.64□□□□□ -0.07
LAMA1P25391 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 AC020916.1-201ENST00000587762 1774 ntBASIC14.64□□□□□ -0.07
LAMA1P25391 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LAMA1P25391 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.64□□□□□ -0.07
LAMA1P25391 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.64□□□□□ -0.07
LAMA1P25391 AC006504.5-208ENST00000588784 2401 ntBASIC14.64□□□□□ -0.07
LAMA1P25391 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.64□□□□□ -0.07
LAMA1P25391 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.64□□□□□ -0.07
LAMA1P25391 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.64□□□□□ -0.07
LAMA1P25391 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
LAMA1P25391 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 AC027139.1-201ENST00000565286 951 ntBASIC14.64□□□□□ -0.07
LAMA1P25391 AL161773.1-201ENST00000624845 863 ntBASIC14.64□□□□□ -0.07
LAMA1P25391 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.64□□□□□ -0.07
LAMA1P25391 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 AC136621.1-201ENST00000624017 2304 ntBASIC14.64□□□□□ -0.07
LAMA1P25391 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.64□□□□□ -0.07
LAMA1P25391 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 AC005632.3-201ENST00000605544 308 ntBASIC14.64□□□□□ -0.07
LAMA1P25391 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.64□□□□□ -0.07
LAMA1P25391 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LAMA1P25391 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.64□□□□□ -0.07
LAMA1P25391 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.64□□□□□ -0.07
LAMA1P25391 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
LAMA1P25391 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.63□□□□□ -0.07
LAMA1P25391 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
LAMA1P25391 FAM90A7P-201ENST00000382628 1395 ntBASIC14.63□□□□□ -0.07
LAMA1P25391 FAM90A23P-201ENST00000400136 1395 ntBASIC14.63□□□□□ -0.07
LAMA1P25391 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms