Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL3L1P16619 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL3L1P16619 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.66□□□□□ -0.38
CCL3L1P16619 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CCL3L1P16619 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL3L1P16619 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL3L1P16619 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CCL3L1P16619 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL3L1P16619 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.66□□□□□ -0.38
CCL3L1P16619 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.66□□□□□ -0.38
CCL3L1P16619 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL3L1P16619 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.66□□□□□ -0.38
CCL3L1P16619 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL3L1P16619 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CCL3L1P16619 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CCL3L1P16619 AL033527.5-201ENST00000641382 801 ntBASIC12.66□□□□□ -0.38
CCL3L1P16619 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CCL3L1P16619 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.66□□□□□ -0.38
CCL3L1P16619 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCL3L1P16619 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL3L1P16619 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.66□□□□□ -0.38
CCL3L1P16619 TCAF2P1-201ENST00000291129 2421 ntBASIC12.66□□□□□ -0.38
CCL3L1P16619 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.66□□□□□ -0.38
CCL3L1P16619 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 AP000845.1-201ENST00000581677 2131 ntBASIC12.65□□□□□ -0.38
CCL3L1P16619 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL3L1P16619 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 AC007787.1-201ENST00000588095 1583 ntBASIC12.65□□□□□ -0.38
CCL3L1P16619 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CCL3L1P16619 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CCL3L1P16619 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 COX20P2-201ENST00000452636 358 ntBASIC12.65□□□□□ -0.38
CCL3L1P16619 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CCL3L1P16619 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.65□□□□□ -0.38
CCL3L1P16619 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.65□□□□□ -0.38
CCL3L1P16619 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL3L1P16619 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CCL3L1P16619 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CCL3L1P16619 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL3L1P16619 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL3L1P16619 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL3L1P16619 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms