Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA4P13612 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA4P13612 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
ITGA4P13612 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ITGA4P13612 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA4P13612 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA4P13612 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.85■□□□□ 0.29
ITGA4P13612 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ITGA4P13612 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA4P13612 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA4P13612 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ITGA4P13612 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
ITGA4P13612 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ITGA4P13612 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.84■□□□□ 0.29
ITGA4P13612 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.84■□□□□ 0.29
ITGA4P13612 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ITGA4P13612 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ITGA4P13612 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.84■□□□□ 0.29
ITGA4P13612 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.84■□□□□ 0.29
ITGA4P13612 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ITGA4P13612 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.84■□□□□ 0.29
ITGA4P13612 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.84■□□□□ 0.29
ITGA4P13612 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.84■□□□□ 0.29
ITGA4P13612 HLA-V-201ENST00000429037 534 ntBASIC16.84■□□□□ 0.29
ITGA4P13612 FTH1P14-201ENST00000482930 551 ntBASIC16.84■□□□□ 0.29
ITGA4P13612 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.84■□□□□ 0.29
ITGA4P13612 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.84■□□□□ 0.29
ITGA4P13612 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.84■□□□□ 0.29
ITGA4P13612 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.84■□□□□ 0.29
ITGA4P13612 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.84■□□□□ 0.29
ITGA4P13612 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ITGA4P13612 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ITGA4P13612 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.84■□□□□ 0.29
ITGA4P13612 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 AL138799.1-201ENST00000448213 1675 ntBASIC16.84■□□□□ 0.29
ITGA4P13612 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.84■□□□□ 0.29
ITGA4P13612 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.84■□□□□ 0.29
ITGA4P13612 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
ITGA4P13612 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ITGA4P13612 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.83■□□□□ 0.29
ITGA4P13612 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
ITGA4P13612 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.83■□□□□ 0.28
ITGA4P13612 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ITGA4P13612 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.83■□□□□ 0.28
ITGA4P13612 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ITGA4P13612 AC016694.1-201ENST00000434179 700 ntBASIC16.83■□□□□ 0.28
ITGA4P13612 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.83■□□□□ 0.28
ITGA4P13612 BNIP3P42-201ENST00000454982 569 ntBASIC16.83■□□□□ 0.28
ITGA4P13612 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.83■□□□□ 0.28
ITGA4P13612 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.83■□□□□ 0.28
ITGA4P13612 AC022137.2-201ENST00000503482 481 ntBASIC16.83■□□□□ 0.28
ITGA4P13612 AC106760.1-201ENST00000508690 800 ntBASIC16.83■□□□□ 0.28
ITGA4P13612 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.83■□□□□ 0.28
ITGA4P13612 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.83■□□□□ 0.28
ITGA4P13612 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.83■□□□□ 0.28
ITGA4P13612 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.83■□□□□ 0.28
ITGA4P13612 BNIP3P29-201ENST00000598302 571 ntBASIC16.83■□□□□ 0.28
ITGA4P13612 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.83■□□□□ 0.28
ITGA4P13612 AC011447.5-201ENST00000616168 564 ntBASIC16.83■□□□□ 0.28
ITGA4P13612 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.83■□□□□ 0.28
ITGA4P13612 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.83■□□□□ 0.28
ITGA4P13612 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.83■□□□□ 0.28
ITGA4P13612 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ITGA4P13612 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ITGA4P13612 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.82■□□□□ 0.28
ITGA4P13612 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ITGA4P13612 AC093525.8-201ENST00000624099 1342 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms