Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MIR661-201ENST00000384842 89 ntBASIC15.01□□□□□ -0.01
CDH1P12830 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH1P12830 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH1P12830 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.01□□□□□ -0.01
CDH1P12830 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH1P12830 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH1P12830 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.01□□□□□ -0.01
CDH1P12830 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH1P12830 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH1P12830 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH1P12830 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDH1P12830 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH1P12830 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
CDH1P12830 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH1P12830 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CDH1P12830 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH1P12830 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 CLK3P2-201ENST00000427566 1453 ntBASIC15.01□□□□□ -0.01
CDH1P12830 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH1P12830 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH1P12830 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 AL359258.3-201ENST00000622910 2331 ntBASIC15□□□□□ -0.01
CDH1P12830 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH1P12830 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CDH1P12830 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15□□□□□ -0.01
CDH1P12830 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH1P12830 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CDH1P12830 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15□□□□□ -0.01
CDH1P12830 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CDH1P12830 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH1P12830 OSM-203ENST00000403463 464 ntTSL 3 BASIC15□□□□□ -0.01
CDH1P12830 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15□□□□□ -0.01
CDH1P12830 SPTLC1P1-201ENST00000447199 261 ntBASIC15□□□□□ -0.01
CDH1P12830 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15□□□□□ -0.01
CDH1P12830 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15□□□□□ -0.01
CDH1P12830 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15□□□□□ -0.01
CDH1P12830 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15□□□□□ -0.01
CDH1P12830 AL391069.4-201ENST00000609583 481 ntBASIC15□□□□□ -0.01
CDH1P12830 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15□□□□□ -0.01
CDH1P12830 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15□□□□□ -0.01
CDH1P12830 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15□□□□□ -0.01
CDH1P12830 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDH1P12830 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CDH1P12830 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH1P12830 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH1P12830 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH1P12830 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH1P12830 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH1P12830 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CDH1P12830 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH1P12830 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH1P12830 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH1P12830 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH1P12830 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CDH1P12830 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH1P12830 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH1P12830 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDH1P12830 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH1P12830 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH1P12830 AC236430.1-201ENST00000402231 743 ntBASIC14.99□□□□□ -0.01
CDH1P12830 RPL5P21-201ENST00000404620 815 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms