Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.89■□□□□ 0.13
CD48P09326 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CD48P09326 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.89■□□□□ 0.13
CD48P09326 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CD48P09326 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 AL360270.3-201ENST00000609118 1348 ntBASIC15.89■□□□□ 0.13
CD48P09326 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD48P09326 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.89■□□□□ 0.13
CD48P09326 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD48P09326 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 SLC7A15P-201ENST00000424028 1363 ntBASIC15.88■□□□□ 0.13
CD48P09326 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.88■□□□□ 0.13
CD48P09326 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CD48P09326 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CD48P09326 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.88■□□□□ 0.13
CD48P09326 AC098850.1-201ENST00000419919 790 ntBASIC15.88■□□□□ 0.13
CD48P09326 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.88■□□□□ 0.13
CD48P09326 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.88■□□□□ 0.13
CD48P09326 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CD48P09326 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 AC004066.1-201ENST00000502488 802 ntBASIC15.88■□□□□ 0.13
CD48P09326 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.88■□□□□ 0.13
CD48P09326 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CD48P09326 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.88■□□□□ 0.13
CD48P09326 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 MTHFR-210ENST00000641407 2387 ntBASIC15.88■□□□□ 0.13
CD48P09326 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.88■□□□□ 0.13
CD48P09326 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CD48P09326 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CD48P09326 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CD48P09326 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.88■□□□□ 0.13
CD48P09326 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CD48P09326 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CD48P09326 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CD48P09326 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.88■□□□□ 0.13
CD48P09326 AL009178.2-201ENST00000597278 2719 ntBASIC15.88■□□□□ 0.13
CD48P09326 LILRP1-201ENST00000444199 1370 ntBASIC15.87■□□□□ 0.13
CD48P09326 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.87■□□□□ 0.13
CD48P09326 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.87■□□□□ 0.13
CD48P09326 AC139749.1-202ENST00000617529 3139 ntBASIC15.87■□□□□ 0.13
CD48P09326 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CD48P09326 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.87■□□□□ 0.13
CD48P09326 AL138799.1-201ENST00000448213 1675 ntBASIC15.87■□□□□ 0.13
CD48P09326 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.87■□□□□ 0.13
CD48P09326 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.87■□□□□ 0.13
CD48P09326 AL353779.1-201ENST00000434793 351 ntBASIC15.87■□□□□ 0.13
CD48P09326 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.87■□□□□ 0.13
CD48P09326 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.87■□□□□ 0.13
CD48P09326 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CD48P09326 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.87■□□□□ 0.13
CD48P09326 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.87■□□□□ 0.13
CD48P09326 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CD48P09326 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 BRI3BPP1-201ENST00000594224 787 ntBASIC15.87■□□□□ 0.13
CD48P09326 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.87■□□□□ 0.13
CD48P09326 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CD48P09326 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.87■□□□□ 0.13
CD48P09326 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 AC093525.8-201ENST00000624099 1342 ntBASIC15.87■□□□□ 0.13
CD48P09326 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.87■□□□□ 0.13
CD48P09326 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.87■□□□□ 0.13
CD48P09326 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 AC232323.1-201ENST00000540724 2099 ntBASIC15.87■□□□□ 0.13
CD48P09326 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD48P09326 AL158070.2-201ENST00000623713 1621 ntBASIC15.86■□□□□ 0.13
CD48P09326 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.86■□□□□ 0.13
CD48P09326 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.86■□□□□ 0.13
CD48P09326 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD48P09326 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms