Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.16□□□□□ -0.14
THBS1P07996 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.16□□□□□ -0.14
THBS1P07996 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.16□□□□□ -0.14
THBS1P07996 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 AC007787.1-201ENST00000588095 1583 ntBASIC14.16□□□□□ -0.14
THBS1P07996 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
THBS1P07996 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.16□□□□□ -0.14
THBS1P07996 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
THBS1P07996 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
THBS1P07996 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.15□□□□□ -0.14
THBS1P07996 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
THBS1P07996 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.15□□□□□ -0.14
THBS1P07996 AC022144.1-201ENST00000602255 1580 ntBASIC14.15□□□□□ -0.14
THBS1P07996 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.15□□□□□ -0.14
THBS1P07996 AC004890.2-204ENST00000481968 304 ntBASIC14.15□□□□□ -0.14
THBS1P07996 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.15□□□□□ -0.14
THBS1P07996 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.15□□□□□ -0.14
THBS1P07996 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.15□□□□□ -0.14
THBS1P07996 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
THBS1P07996 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 AL390754.1-201ENST00000619088 582 ntBASIC14.15□□□□□ -0.14
THBS1P07996 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.15□□□□□ -0.14
THBS1P07996 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.15□□□□□ -0.14
THBS1P07996 AC105233.6-201ENST00000642093 218 ntBASIC14.15□□□□□ -0.14
THBS1P07996 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.15□□□□□ -0.14
THBS1P07996 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.15□□□□□ -0.14
THBS1P07996 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.15□□□□□ -0.14
THBS1P07996 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
THBS1P07996 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.15□□□□□ -0.14
THBS1P07996 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.15□□□□□ -0.14
THBS1P07996 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.15□□□□□ -0.15
THBS1P07996 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.14□□□□□ -0.15
THBS1P07996 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
THBS1P07996 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS1P07996 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS1P07996 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
THBS1P07996 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS1P07996 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.14□□□□□ -0.15
THBS1P07996 TSPY16P-201ENST00000449843 468 ntBASIC14.14□□□□□ -0.15
THBS1P07996 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS1P07996 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS1P07996 AC135586.1-201ENST00000539323 574 ntBASIC14.14□□□□□ -0.15
THBS1P07996 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS1P07996 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC14.14□□□□□ -0.15
THBS1P07996 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS1P07996 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.14□□□□□ -0.15
THBS1P07996 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS1P07996 AC036164.1-201ENST00000570544 333 ntBASIC14.14□□□□□ -0.15
THBS1P07996 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms