Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGN1P05114 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
HMGN1P05114 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.96□□□□□ -0.17
HMGN1P05114 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGN1P05114 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HMGN1P05114 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGN1P05114 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.96□□□□□ -0.17
HMGN1P05114 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGN1P05114 AL133267.1-201ENST00000398220 340 ntBASIC13.96□□□□□ -0.17
HMGN1P05114 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.96□□□□□ -0.17
HMGN1P05114 SLED1-202ENST00000512051 380 ntBASIC13.96□□□□□ -0.17
HMGN1P05114 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.96□□□□□ -0.17
HMGN1P05114 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGN1P05114 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGN1P05114 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGN1P05114 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGN1P05114 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.96□□□□□ -0.17
HMGN1P05114 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGN1P05114 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.96□□□□□ -0.17
HMGN1P05114 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMGN1P05114 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HMGN1P05114 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HMGN1P05114 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HMGN1P05114 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HMGN1P05114 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
HMGN1P05114 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
HMGN1P05114 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HMGN1P05114 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.96□□□□□ -0.18
HMGN1P05114 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HMGN1P05114 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.96□□□□□ -0.18
HMGN1P05114 AL035456.1-201ENST00000456064 1369 ntBASIC13.96□□□□□ -0.18
HMGN1P05114 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGN1P05114 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HMGN1P05114 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HMGN1P05114 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGN1P05114 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGN1P05114 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
HMGN1P05114 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HMGN1P05114 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.95□□□□□ -0.18
HMGN1P05114 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGN1P05114 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HMGN1P05114 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGN1P05114 AC005237.2-201ENST00000434368 219 ntBASIC13.95□□□□□ -0.18
HMGN1P05114 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.95□□□□□ -0.18
HMGN1P05114 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.95□□□□□ -0.18
HMGN1P05114 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.95□□□□□ -0.18
HMGN1P05114 SLC25A1P1-201ENST00000528351 927 ntBASIC13.95□□□□□ -0.18
HMGN1P05114 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGN1P05114 BANF1P1-201ENST00000553684 263 ntBASIC13.95□□□□□ -0.18
HMGN1P05114 AC003101.2-201ENST00000612557 442 ntBASIC13.95□□□□□ -0.18
HMGN1P05114 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGN1P05114 AC087386.2-201ENST00000623212 4637 ntBASIC13.95□□□□□ -0.18
HMGN1P05114 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HMGN1P05114 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.95□□□□□ -0.18
HMGN1P05114 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.95□□□□□ -0.18
HMGN1P05114 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.95□□□□□ -0.18
HMGN1P05114 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.95□□□□□ -0.18
HMGN1P05114 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMGN1P05114 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.94□□□□□ -0.18
HMGN1P05114 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGN1P05114 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
HMGN1P05114 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.94□□□□□ -0.18
HMGN1P05114 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGN1P05114 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGN1P05114 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGN1P05114 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.94□□□□□ -0.18
HMGN1P05114 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMGN1P05114 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms