Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC190387.1-201ENST00000551683 408 ntBASIC12.12□□□□□ -0.47
TRGV3P03979 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 AC140912.1-201ENST00000577171 1054 ntBASIC12.12□□□□□ -0.47
TRGV3P03979 AC138761.1-201ENST00000584393 385 ntBASIC12.12□□□□□ -0.47
TRGV3P03979 AL049840.4-201ENST00000602422 811 ntBASIC12.12□□□□□ -0.47
TRGV3P03979 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.12□□□□□ -0.47
TRGV3P03979 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRGV3P03979 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRGV3P03979 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
TRGV3P03979 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRGV3P03979 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV3P03979 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV3P03979 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TRGV3P03979 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV3P03979 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TRGV3P03979 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 MYCLP2-201ENST00000449268 967 ntBASIC12.11□□□□□ -0.47
TRGV3P03979 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.11□□□□□ -0.47
TRGV3P03979 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.11□□□□□ -0.47
TRGV3P03979 MIR3197-201ENST00000582241 73 ntBASIC12.11□□□□□ -0.47
TRGV3P03979 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV3P03979 AC027307.3-201ENST00000594262 1100 ntBASIC12.11□□□□□ -0.47
TRGV3P03979 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV3P03979 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.11□□□□□ -0.47
TRGV3P03979 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV3P03979 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRGV3P03979 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 C18orf15-201ENST00000623680 2534 ntBASIC12.11□□□□□ -0.47
TRGV3P03979 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.11□□□□□ -0.47
TRGV3P03979 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.11□□□□□ -0.47
TRGV3P03979 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRGV3P03979 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 PPT1-215ENST00000641471 2368 ntBASIC12.11□□□□□ -0.47
TRGV3P03979 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRGV3P03979 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV3P03979 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRGV3P03979 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRGV3P03979 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV3P03979 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.1□□□□□ -0.47
TRGV3P03979 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.1□□□□□ -0.47
TRGV3P03979 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.1□□□□□ -0.47
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