Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
MT-ND3P03897 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.72■□□□□ 0.11
MT-ND3P03897 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.72■□□□□ 0.11
MT-ND3P03897 EEF1DP4-201ENST00000446006 880 ntBASIC15.72■□□□□ 0.11
MT-ND3P03897 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.72■□□□□ 0.11
MT-ND3P03897 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND3P03897 AC190387.1-201ENST00000551683 408 ntBASIC15.72■□□□□ 0.11
MT-ND3P03897 HNRNPUP1-201ENST00000554987 333 ntBASIC15.72■□□□□ 0.11
MT-ND3P03897 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND3P03897 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND3P03897 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.72■□□□□ 0.11
MT-ND3P03897 AC138761.1-201ENST00000584393 385 ntBASIC15.72■□□□□ 0.11
MT-ND3P03897 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.72■□□□□ 0.11
MT-ND3P03897 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND3P03897 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.72■□□□□ 0.11
MT-ND3P03897 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND3P03897 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
MT-ND3P03897 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
MT-ND3P03897 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND3P03897 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
MT-ND3P03897 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.71■□□□□ 0.11
MT-ND3P03897 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.71■□□□□ 0.11
MT-ND3P03897 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.71■□□□□ 0.11
MT-ND3P03897 INTS4P1-203ENST00000641008 3683 ntBASIC15.71■□□□□ 0.11
MT-ND3P03897 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.71■□□□□ 0.11
MT-ND3P03897 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.71■□□□□ 0.11
MT-ND3P03897 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 AC140479.7-201ENST00000636301 2332 ntBASIC15.71■□□□□ 0.11
MT-ND3P03897 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.71■□□□□ 0.11
MT-ND3P03897 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.71■□□□□ 0.11
MT-ND3P03897 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.71■□□□□ 0.11
MT-ND3P03897 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MT-ND3P03897 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 TREML5P-201ENST00000421694 576 ntBASIC15.71■□□□□ 0.11
MT-ND3P03897 AC142381.1-201ENST00000426099 345 ntBASIC15.71■□□□□ 0.11
MT-ND3P03897 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.71■□□□□ 0.11
MT-ND3P03897 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MT-ND3P03897 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.71■□□□□ 0.11
MT-ND3P03897 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.71■□□□□ 0.11
MT-ND3P03897 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.71■□□□□ 0.11
MT-ND3P03897 AC026979.3-201ENST00000607315 403 ntBASIC15.71■□□□□ 0.11
MT-ND3P03897 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.71■□□□□ 0.11
MT-ND3P03897 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.71■□□□□ 0.11
MT-ND3P03897 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND3P03897 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MT-ND3P03897 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
MT-ND3P03897 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MT-ND3P03897 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.71■□□□□ 0.1
MT-ND3P03897 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.71■□□□□ 0.1
MT-ND3P03897 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MT-ND3P03897 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 AL607033.1-201ENST00000623900 1599 ntBASIC15.7■□□□□ 0.1
MT-ND3P03897 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.7■□□□□ 0.1
MT-ND3P03897 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MT-ND3P03897 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MT-ND3P03897 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.7■□□□□ 0.1
MT-ND3P03897 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND3P03897 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.7■□□□□ 0.1
MT-ND3P03897 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 195.1 ms