Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.51■□□□□ 0.23
CHRNA1P02708 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRNA1P02708 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRNA1P02708 AC104073.2-201ENST00000453737 312 ntBASIC16.51■□□□□ 0.23
CHRNA1P02708 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.51■□□□□ 0.23
CHRNA1P02708 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRNA1P02708 AL136301.1-201ENST00000615830 422 ntBASIC16.51■□□□□ 0.23
CHRNA1P02708 AL162426.1-201ENST00000624141 743 ntBASIC16.51■□□□□ 0.23
CHRNA1P02708 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.51■□□□□ 0.23
CHRNA1P02708 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 AC026691.1-201ENST00000602502 2017 ntBASIC16.51■□□□□ 0.23
CHRNA1P02708 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRNA1P02708 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CHRNA1P02708 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRNA1P02708 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CHRNA1P02708 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHRNA1P02708 AC020910.5-201ENST00000623668 1865 ntBASIC16.5■□□□□ 0.23
CHRNA1P02708 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRNA1P02708 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 KRT8P19-201ENST00000551916 1455 ntBASIC16.5■□□□□ 0.23
CHRNA1P02708 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.5■□□□□ 0.23
CHRNA1P02708 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.5■□□□□ 0.23
CHRNA1P02708 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CHRNA1P02708 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.5■□□□□ 0.23
CHRNA1P02708 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRNA1P02708 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.5■□□□□ 0.23
CHRNA1P02708 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRNA1P02708 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRNA1P02708 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRNA1P02708 AC138696.2-201ENST00000607376 223 ntBASIC16.5■□□□□ 0.23
CHRNA1P02708 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRNA1P02708 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.5■□□□□ 0.23
CHRNA1P02708 AC002472.3-201ENST00000640124 621 ntBASIC16.5■□□□□ 0.23
CHRNA1P02708 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRNA1P02708 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 AL365203.3-201ENST00000609742 2057 ntBASIC16.5■□□□□ 0.23
CHRNA1P02708 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRNA1P02708 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRNA1P02708 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRNA1P02708 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA1P02708 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CHRNA1P02708 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CHRNA1P02708 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
CHRNA1P02708 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.49■□□□□ 0.23
CHRNA1P02708 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNA1P02708 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNA1P02708 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CHRNA1P02708 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRNA1P02708 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRNA1P02708 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA1P02708 AC004899.1-201ENST00000424687 1714 ntBASIC16.49■□□□□ 0.23
CHRNA1P02708 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRNA1P02708 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.49■□□□□ 0.23
CHRNA1P02708 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CHRNA1P02708 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.49■□□□□ 0.23
CHRNA1P02708 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNA1P02708 AC005324.6-201ENST00000587972 613 ntBASIC16.49■□□□□ 0.23
CHRNA1P02708 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNA1P02708 AC009955.4-201ENST00000597192 544 ntBASIC16.49■□□□□ 0.23
CHRNA1P02708 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms