Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 AC130686.1-201ENST00000622936 2466 ntBASIC11.61□□□□□ -0.55
HLA-DQA1P01909 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DQA1P01909 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 AC015818.8-201ENST00000587907 1519 ntBASIC11.6□□□□□ -0.55
HLA-DQA1P01909 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 AC018892.3-201ENST00000623986 2499 ntBASIC11.6□□□□□ -0.55
HLA-DQA1P01909 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 AC004945.1-201ENST00000416738 983 ntBASIC11.6□□□□□ -0.55
HLA-DQA1P01909 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 ABCD1P5-201ENST00000445663 754 ntBASIC11.6□□□□□ -0.55
HLA-DQA1P01909 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.6□□□□□ -0.55
HLA-DQA1P01909 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DQA1P01909 AC129492.6-201ENST00000611383 1305 ntBASIC11.6□□□□□ -0.55
HLA-DQA1P01909 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
HLA-DQA1P01909 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms