Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NKX2-2O95096 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX2-2O95096 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-2O95096 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NKX2-2O95096 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
NKX2-2O95096 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX2-2O95096 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
NKX2-2O95096 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX2-2O95096 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX2-2O95096 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NKX2-2O95096 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NKX2-2O95096 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX2-2O95096 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX2-2O95096 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX2-2O95096 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NKX2-2O95096 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX2-2O95096 WASH4P-201ENST00000564273 1246 ntBASIC14.12□□□□□ -0.15
NKX2-2O95096 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.12□□□□□ -0.15
NKX2-2O95096 WFDC1-204ENST00000613603 549 ntBASIC14.12□□□□□ -0.15
NKX2-2O95096 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX2-2O95096 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 KRT8P14-201ENST00000414254 1442 ntBASIC14.12□□□□□ -0.15
NKX2-2O95096 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NKX2-2O95096 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NKX2-2O95096 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX2-2O95096 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
NKX2-2O95096 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NKX2-2O95096 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-2O95096 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-2O95096 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX2-2O95096 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX2-2O95096 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-2O95096 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX2-2O95096 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-2O95096 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
NKX2-2O95096 AL162726.2-201ENST00000438986 1017 ntBASIC14.11□□□□□ -0.15
NKX2-2O95096 CRB3P1-201ENST00000449338 276 ntBASIC14.11□□□□□ -0.15
NKX2-2O95096 AC114812.1-204ENST00000449669 728 ntBASIC14.11□□□□□ -0.15
NKX2-2O95096 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-2O95096 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX2-2O95096 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.11□□□□□ -0.15
NKX2-2O95096 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
NKX2-2O95096 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-2O95096 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.11□□□□□ -0.15
NKX2-2O95096 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX2-2O95096 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX2-2O95096 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX2-2O95096 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-2O95096 AC005252.2-201ENST00000624630 1141 ntBASIC14.11□□□□□ -0.15
NKX2-2O95096 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-2O95096 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-2O95096 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 AC099063.4-201ENST00000641099 1602 ntBASIC14.11□□□□□ -0.15
NKX2-2O95096 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX2-2O95096 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-2O95096 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
NKX2-2O95096 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX2-2O95096 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms