Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TO15178 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.15□□□□□ -0.14
TO15178 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.15□□□□□ -0.14
TO15178 AC009486.1-201ENST00000569860 813 ntBASIC14.15□□□□□ -0.14
TO15178 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.15□□□□□ -0.14
TO15178 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.15□□□□□ -0.14
TO15178 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.15□□□□□ -0.14
TO15178 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.15□□□□□ -0.14
TO15178 AP005019.2-201ENST00000615104 511 ntBASIC14.15□□□□□ -0.14
TO15178 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TO15178 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
TO15178 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
TO15178 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
TO15178 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TO15178 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TO15178 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TO15178 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.15□□□□□ -0.14
TO15178 AL158070.2-201ENST00000623713 1621 ntBASIC14.15□□□□□ -0.14
TO15178 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TO15178 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 NORAD-201ENST00000565493 5339 ntBASIC14.15□□□□□ -0.14
TO15178 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.15□□□□□ -0.14
TO15178 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TO15178 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.15□□□□□ -0.14
TO15178 AL360270.3-201ENST00000609118 1348 ntBASIC14.15□□□□□ -0.15
TO15178 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.14□□□□□ -0.15
TO15178 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.14□□□□□ -0.15
TO15178 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.14□□□□□ -0.15
TO15178 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.14□□□□□ -0.15
TO15178 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.14□□□□□ -0.15
TO15178 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.14□□□□□ -0.15
TO15178 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.14□□□□□ -0.15
TO15178 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 AC114812.1-204ENST00000449669 728 ntBASIC14.14□□□□□ -0.15
TO15178 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TO15178 AP001582.1-201ENST00000525856 295 ntBASIC14.14□□□□□ -0.15
TO15178 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.14□□□□□ -0.15
TO15178 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.14□□□□□ -0.15
TO15178 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TO15178 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.14□□□□□ -0.15
TO15178 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.14□□□□□ -0.15
TO15178 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.14□□□□□ -0.15
TO15178 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.14□□□□□ -0.15
TO15178 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.14□□□□□ -0.15
TO15178 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TO15178 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TO15178 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TO15178 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.13□□□□□ -0.15
TO15178 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TO15178 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.13□□□□□ -0.15
TO15178 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.13□□□□□ -0.15
TO15178 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TO15178 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TO15178 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms