Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC23.87■■□□□ 1.41
CHD1O14646 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC23.87■■□□□ 1.41
CHD1O14646 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
CHD1O14646 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC23.87■■□□□ 1.41
CHD1O14646 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD1O14646 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHD1O14646 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC23.86■■□□□ 1.41
CHD1O14646 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC23.86■■□□□ 1.41
CHD1O14646 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHD1O14646 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC23.86■■□□□ 1.41
CHD1O14646 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC23.86■■□□□ 1.41
CHD1O14646 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHD1O14646 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHD1O14646 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC23.86■■□□□ 1.41
CHD1O14646 AC006372.4-201ENST00000624122 1543 ntBASIC23.86■■□□□ 1.41
CHD1O14646 NHP2P1-201ENST00000335274 462 ntBASIC23.86■■□□□ 1.41
CHD1O14646 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
CHD1O14646 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC23.86■■□□□ 1.41
CHD1O14646 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC23.86■■□□□ 1.41
CHD1O14646 AC080013.5-201ENST00000607044 679 ntBASIC23.86■■□□□ 1.41
CHD1O14646 AC004466.2-201ENST00000614749 516 ntBASIC23.86■■□□□ 1.41
CHD1O14646 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC23.86■■□□□ 1.41
CHD1O14646 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHD1O14646 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHD1O14646 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHD1O14646 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CHD1O14646 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHD1O14646 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CHD1O14646 AC099398.1-201ENST00000567919 2776 ntBASIC23.85■■□□□ 1.41
CHD1O14646 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CHD1O14646 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC23.85■■□□□ 1.41
CHD1O14646 HNRNPA1P27-201ENST00000412087 955 ntBASIC23.85■■□□□ 1.41
CHD1O14646 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC23.85■■□□□ 1.41
CHD1O14646 LINC00244-201ENST00000625073 613 ntBASIC23.85■■□□□ 1.41
CHD1O14646 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC23.85■■□□□ 1.41
CHD1O14646 AP000769.1-203ENST00000637245 208 ntBASIC23.85■■□□□ 1.41
CHD1O14646 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CHD1O14646 FLJ38576-201ENST00000623820 2459 ntBASIC23.85■■□□□ 1.41
CHD1O14646 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
CHD1O14646 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
CHD1O14646 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CHD1O14646 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHD1O14646 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
CHD1O14646 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC23.85■■□□□ 1.41
CHD1O14646 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHD1O14646 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC23.85■■□□□ 1.41
CHD1O14646 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHD1O14646 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CHD1O14646 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC23.85■■□□□ 1.41
CHD1O14646 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC23.84■■□□□ 1.41
CHD1O14646 AC092896.1-201ENST00000465850 380 ntBASIC23.84■■□□□ 1.41
CHD1O14646 AL160191.2-201ENST00000603975 601 ntBASIC23.84■■□□□ 1.41
CHD1O14646 FUCA1P1-201ENST00000374476 1351 ntBASIC23.84■■□□□ 1.41
CHD1O14646 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 CEP83-AS1-201ENST00000623122 2482 ntBASIC23.84■■□□□ 1.41
CHD1O14646 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.84■■□□□ 1.41
CHD1O14646 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC23.84■■□□□ 1.41
CHD1O14646 ST13P19-201ENST00000442505 1124 ntBASIC23.84■■□□□ 1.41
CHD1O14646 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC23.84■■□□□ 1.41
CHD1O14646 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 RN7SL530P-201ENST00000485097 298 ntBASIC23.84■■□□□ 1.41
CHD1O14646 LINC02447-202ENST00000501888 2146 ntBASIC23.84■■□□□ 1.41
CHD1O14646 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC23.84■■□□□ 1.41
CHD1O14646 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
CHD1O14646 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHD1O14646 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CHD1O14646 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CHD1O14646 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHD1O14646 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC23.83■■□□□ 1.41
CHD1O14646 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHD1O14646 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC23.83■■□□□ 1.41
CHD1O14646 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC23.83■■□□□ 1.41
CHD1O14646 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC23.83■■□□□ 1.41
CHD1O14646 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC23.83■■□□□ 1.41
CHD1O14646 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC23.83■■□□□ 1.41
CHD1O14646 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC23.83■■□□□ 1.41
CHD1O14646 KNOP1P1-201ENST00000542108 989 ntBASIC23.83■■□□□ 1.41
CHD1O14646 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC23.83■■□□□ 1.41
CHD1O14646 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC23.83■■□□□ 1.41
CHD1O14646 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHD1O14646 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHD1O14646 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC23.83■■□□□ 1.41
CHD1O14646 AC023090.2-201ENST00000625182 2110 ntBASIC23.83■■□□□ 1.41
CHD1O14646 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC23.83■■□□□ 1.41
CHD1O14646 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CHD1O14646 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC23.83■■□□□ 1.4
CHD1O14646 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms