Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 RNU1-114P-201ENST00000365297 166 ntBASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 CLUHP6-201ENST00000580789 941 ntBASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 FAM45BP-202ENST00000592932 1624 ntBASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 AL137783.1-201ENST00000623494 1896 ntBASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 CICP14-201ENST00000629111 2732 ntBASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPB9F8W1W9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 ACKR1-201ENST00000368121 1240 ntBASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 CRB3P1-201ENST00000449338 276 ntBASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 AC114812.1-204ENST00000449669 728 ntBASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 AP001582.1-201ENST00000525856 295 ntBASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 NFIC-211ENST00000641145 8399 ntBASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NPIPB9F8W1W9 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPB9F8W1W9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms