Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFAP99D6REC4 PIN1P1-201ENST00000412108 996 ntBASIC15.4■□□□□ 0.06
CFAP99D6REC4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 AL353779.1-201ENST00000434793 351 ntBASIC15.4■□□□□ 0.06
CFAP99D6REC4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.4■□□□□ 0.06
CFAP99D6REC4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFAP99D6REC4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CFAP99D6REC4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFAP99D6REC4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFAP99D6REC4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CFAP99D6REC4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CFAP99D6REC4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CFAP99D6REC4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
CFAP99D6REC4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 SBF1P1-201ENST00000444527 5631 ntBASIC15.39■□□□□ 0.05
CFAP99D6REC4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 RN7SL399P-201ENST00000471648 279 ntBASIC15.39■□□□□ 0.05
CFAP99D6REC4 FAM86LP-201ENST00000478302 853 ntBASIC15.39■□□□□ 0.05
CFAP99D6REC4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 AL391069.4-201ENST00000609583 481 ntBASIC15.39■□□□□ 0.05
CFAP99D6REC4 AC004790.1-201ENST00000612686 536 ntBASIC15.39■□□□□ 0.05
CFAP99D6REC4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CFAP99D6REC4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CFAP99D6REC4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.38■□□□□ 0.05
CFAP99D6REC4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CFAP99D6REC4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.38■□□□□ 0.05
CFAP99D6REC4 AP001542.1-201ENST00000591314 200 ntBASIC15.38■□□□□ 0.05
CFAP99D6REC4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms