Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 AL512343.1-201ENST00000605837 169 ntBASIC15.97■□□□□ 0.15
SRRM3A6NNA2 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 AL365330.1-201ENST00000607459 531 ntBASIC15.97■□□□□ 0.15
SRRM3A6NNA2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SRRM3A6NNA2 TCAF1P1-201ENST00000414990 2232 ntBASIC15.96■□□□□ 0.15
SRRM3A6NNA2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 AC127383.1-201ENST00000444697 1800 ntBASIC15.96■□□□□ 0.15
SRRM3A6NNA2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 SLC25A6P2-201ENST00000497974 877 ntBASIC15.96■□□□□ 0.15
SRRM3A6NNA2 AC119751.2-201ENST00000504529 210 ntBASIC15.96■□□□□ 0.15
SRRM3A6NNA2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 AP005482.1-201ENST00000563722 1273 ntBASIC15.96■□□□□ 0.15
SRRM3A6NNA2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 SPDYE12P-201ENST00000618416 771 ntBASIC15.96■□□□□ 0.15
SRRM3A6NNA2 COX11-210ENST00000639671 696 ntBASIC15.96■□□□□ 0.15
SRRM3A6NNA2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 WASH3P-207ENST00000560956 1394 ntBASIC15.96■□□□□ 0.15
SRRM3A6NNA2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
SRRM3A6NNA2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SRRM3A6NNA2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SRRM3A6NNA2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SRRM3A6NNA2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SRRM3A6NNA2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SRRM3A6NNA2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.96■□□□□ 0.14
SRRM3A6NNA2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
SRRM3A6NNA2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.96■□□□□ 0.14
SRRM3A6NNA2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SRRM3A6NNA2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 KRT223P-202ENST00000449164 1292 ntBASIC15.95■□□□□ 0.14
SRRM3A6NNA2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 AL138828.2-201ENST00000615812 383 ntBASIC15.95■□□□□ 0.14
SRRM3A6NNA2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SRRM3A6NNA2 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms