Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 AL109837.1-201ENST00000603272 613 ntBASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 AL157813.1-201ENST00000612996 587 ntBASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 AC242376.2-201ENST00000619355 883 ntBASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 AC010491.1-201ENST00000563101 2797 ntBASIC23.18■■□□□ 1.3
PLEKHD1A6NEE1 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 AC020916.1-201ENST00000587762 1774 ntBASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 RPS9P1-201ENST00000419943 583 ntBASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 HPGD-203ENST00000422112 805 ntTSL 2 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 AC026320.2-201ENST00000434379 478 ntBASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 RPL7P35-201ENST00000446943 740 ntBASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 AP001065.2-201ENST00000617205 644 ntBASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PLEKHD1A6NEE1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 CAP2P1-201ENST00000557743 1390 ntBASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 AL627389.1-201ENST00000413508 1182 ntBASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 RPL13AP19-201ENST00000434320 584 ntBASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 AC008723.1-201ENST00000506922 207 ntBASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 FOS-204ENST00000554617 796 ntTSL 2 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 AL031713.1-201ENST00000564813 661 ntBASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 MIR3677-201ENST00000578964 60 ntBASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PLEKHD1A6NEE1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 AL157407.1-201ENST00000435784 904 ntBASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 AC130709.1-201ENST00000484779 1212 ntBASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 AP002803.1-201ENST00000528836 498 ntBASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 MIR6769A-201ENST00000617340 73 ntBASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 AL359258.3-201ENST00000622910 2331 ntBASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 AC105250.1-201ENST00000509378 2057 ntBASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC23.15■■□□□ 1.3
PLEKHD1A6NEE1 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PLEKHD1A6NEE1 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC23.14■■□□□ 1.3
PLEKHD1A6NEE1 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PLEKHD1A6NEE1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PLEKHD1A6NEE1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms