Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.35□□□□□ -0.27
MBD3L3A6NE82 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.35□□□□□ -0.27
MBD3L3A6NE82 CALR4P-201ENST00000431943 946 ntBASIC13.35□□□□□ -0.27
MBD3L3A6NE82 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 AC100850.1-201ENST00000506768 649 ntBASIC13.35□□□□□ -0.27
MBD3L3A6NE82 SCARNA20.5-201ENST00000516991 142 ntBASIC13.35□□□□□ -0.27
MBD3L3A6NE82 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.35□□□□□ -0.27
MBD3L3A6NE82 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 AC138028.6-201ENST00000616106 1482 ntBASIC13.35□□□□□ -0.27
MBD3L3A6NE82 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MBD3L3A6NE82 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 LILRP1-201ENST00000444199 1370 ntBASIC13.34□□□□□ -0.27
MBD3L3A6NE82 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AKR7A2P1-201ENST00000460134 915 ntBASIC13.34□□□□□ -0.27
MBD3L3A6NE82 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AC020914.3-201ENST00000594712 304 ntBASIC13.34□□□□□ -0.27
MBD3L3A6NE82 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AC007663.3-201ENST00000609632 465 ntBASIC13.34□□□□□ -0.27
MBD3L3A6NE82 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AC008894.3-201ENST00000624324 3103 ntBASIC13.34□□□□□ -0.27
MBD3L3A6NE82 AC112693.3-201ENST00000624819 1983 ntBASIC13.34□□□□□ -0.27
MBD3L3A6NE82 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MBD3L3A6NE82 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
MBD3L3A6NE82 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
MBD3L3A6NE82 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
MBD3L3A6NE82 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
MBD3L3A6NE82 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
MBD3L3A6NE82 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms